RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 KANSL3Q9P2N6 904 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 NOC2LQ9Y3T9 749 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 E9PMD0 336 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 N4BP3O15049 544 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 ZBTB39O15060 712 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 ZNF623O75123 536 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 PLS3P13797 630 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 CDC25AP30304 524 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 GPNMBQ14956 572 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 KARSQ15046 597 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 FAM173BQ6P4H8 233 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 FAM228AQ86W67 206 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 TIFAQ96CG3 184 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 HVCN1Q96D96 273 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 XPNPEP1Q9NQW7 623 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 PIN4Q9Y237 131 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-208ENST00000552890 TMEM150BA6NC51 233 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 ACKR2O00590 384 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 HIP1RO75146 1068 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 NR1I2O75469 434 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 RB1P06400 928 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 KCNA4P22459 653 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 GLRA2P23416 452 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 DNAJB2P25686 324 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 FAM189BP81408 668 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 DCAF4L1Q3SXM0 396 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 FIBCD1Q8N539 461 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 EPSTI1Q96J88 318 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 PNMA5Q96PV4 448 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 SH2D3AQ9BRG2 576 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 PLVAPQ9BX97 442 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 MRPL4Q9BYD3 311 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 PCDHA7Q9UN72 937 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 EXOC7Q9UPT5 735 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
TRAFD1-208ENST00000552890 C9IYK1 514 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 GOLGA6L22H0YM25 854 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 KIF20AO95235 890 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 SLFN14P0C7P3 912 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 ZNF131P52739 623 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 HTRA4P83105 476 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 DRP2Q13474 957 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 CAPSQ13938 189 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 DSC3Q14574 896 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 ECM1Q16610 540 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 MAEAQ7L5Y9 396 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 URGCPQ8TCY9 931 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 TSPAN18Q96SJ8 248 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 FZD8Q9H461 694 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
TRAFD1-208ENST00000552890 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 TTC3P53804 2025 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 POLR2DO15514 142 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 DGKIO75912 1065 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 PRKCBP05771 671 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 PPM1AP35813 382 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 SYKP43405 635 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 NPTX2P47972 431 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 PEX3P56589 373 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 PKP1Q13835 747 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 BTG3Q14201 252 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 POSTNQ15063 836 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 ZPBP2Q6X784 338 aa11.3□□□□□ -0.6
TRAFD1-208ENST00000552890 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms