RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 MYH9P35579 1960 aaKnown RBP13.3□□□□□ -0.28
CKAP4-202ENST00000552828 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
CKAP4-202ENST00000552828 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 ST18O60284 1047 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 OFD1O75665 1012 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
CKAP4-202ENST00000552828 GALTP07902 379 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 CTSAP10619 480 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 RAB27AP51159 221 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 AK2P54819 239 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 CCT2P78371 535 aaKnown RBP13.29□□□□□ -0.28
CKAP4-202ENST00000552828 NPY5RQ15761 445 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 MTERF2Q49AM1 385 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 TWF2Q6IBS0 349 aaKnown RBP13.29□□□□□ -0.28
CKAP4-202ENST00000552828 GALNT17Q6IS24 598 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 GLB1LQ6UWU2 654 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 ANO5Q75V66 913 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 DAGLBQ8NCG7 672 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 SLC22A17Q8WUG5 538 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 NRDE2Q9H7Z3 1164 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 IFT122Q9HBG6 1241 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 FAM105AQ9NUU6 356 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
CKAP4-202ENST00000552828 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
CKAP4-202ENST00000552828 KMT2EQ8IZD2 1858 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 CPLX1O14810 134 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 TDP2O95551 362 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 BRD1O95696 1058 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 SP100P23497 879 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 PSMC5P62195 406 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 NOMO2Q5JPE7 1267 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 ATAT1Q5SQI0 421 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 BCL7CQ8WUZ0 217 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 LPPQ93052 612 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
CKAP4-202ENST00000552828 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
CKAP4-202ENST00000552828 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PROB1E7EW31 1015 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
CKAP4-202ENST00000552828 DEXIO95424 95 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 EPCAMP16422 314 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
CKAP4-202ENST00000552828 STK3Q13188 491 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 RARS2Q5T160 578 aaKnown RBP13.27□□□□□ -0.29
CKAP4-202ENST00000552828 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PPFIBP1Q86W92 1011 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.29
CKAP4-202ENST00000552828 AUTS2Q8WXX7 1259 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 VN1R3Q9BXE9 311 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
CKAP4-202ENST00000552828 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
CKAP4-202ENST00000552828 EML1O00423 815 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 B4GALT3O60512 393 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 PFKFB2O60825 505 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 LILRB3O75022 631 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 WEE2P0C1S8 567 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 QARSP47897 775 aaKnown RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 SLC11A1P49279 550 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 AGMOQ6ZNB7 445 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 TDRD5Q8NAT2 981 aaKnown RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 PGBD4Q96DM1 585 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 FAM20AQ96MK3 541 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 KIF2CQ99661 725 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 LIMD1Q9UGP4 676 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
CKAP4-202ENST00000552828 VAV3Q9UKW4 847 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 WDR87Q6ZQQ6 2873 aa13.26□□□□□ -0.29
CKAP4-202ENST00000552828 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
CKAP4-202ENST00000552828 SLC37A4O43826 429 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms