RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 NCDNQ9UBB6 729 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
CHPT1-209ENST00000552329 CTDP1Q9Y5B0 961 aaPredicted RBP8.44□□□□□ -1.06
CHPT1-209ENST00000552329 PCDHB6Q9Y5E3 794 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 CEP170Q5SW79 1584 aa8.44□□□□□ -1.06
CHPT1-209ENST00000552329 BRINP1O60477 761 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 EYA4O95677 639 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 POU3F3P20264 500 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-209ENST00000552329 MANFP55145 182 aaKnown RBP8.43□□□□□ -1.06
CHPT1-209ENST00000552329 SCAND1P57086 179 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 BPIFB4P59827 614 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 HGFACQ04756 655 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 PPARAQ07869 468 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHPT1-209ENST00000552329 LCE1DQ5T752 114 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 RNF187Q5TA31 235 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-209ENST00000552329 FUKQ8N0W3 1084 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 WDR66Q8TBY9 1149 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 HIST1H2AHQ96KK5 128 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 HIST1H2AJQ99878 128 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHPT1-209ENST00000552329 VWA7Q9Y334 891 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 CLASP1Q7Z460 1538 aa8.43□□□□□ -1.06
CHPT1-209ENST00000552329 PFKMP08237 780 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 SESN3P58005 492 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 NFYCQ13952 458 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 TRIM25Q14258 630 aaKnown RBP8.42□□□□□ -1.06
CHPT1-209ENST00000552329 GPR135Q8IZ08 494 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 GAB3Q8WWW8 586 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 GFM2Q969S9 779 aaKnown RBP8.42□□□□□ -1.06
CHPT1-209ENST00000552329 EAF2Q96CJ1 260 aaPredicted RBP8.42□□□□□ -1.06
CHPT1-209ENST00000552329 DEF6Q9H4E7 631 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 AGO3Q9H9G7 860 aaKnown RBP8.42□□□□□ -1.06
CHPT1-209ENST00000552329 KCNG1Q9UIX4 513 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 CUL7Q14999 1698 aa8.42□□□□□ -1.06
CHPT1-209ENST00000552329 GOLGA8AA7E2F4 631 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 DAPK3O43293 454 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 SLC26A4O43511 780 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 ULK1O75385 1050 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 CPEP16870 476 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 CD69Q07108 199 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 PITRM1Q5JRX3 1037 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 KRT40Q6A162 431 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 GAREM2Q75VX8 874 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 DDX42Q86XP3 938 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHPT1-209ENST00000552329 PALM2Q8IXS6 379 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 CDYL2Q8N8U2 506 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
CHPT1-209ENST00000552329 SLC7A6OSQ96CW6 309 aaPredicted RBP8.41□□□□□ -1.06
CHPT1-209ENST00000552329 MAFGO15525 162 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 TOX4O94842 621 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 MAGEA10P43363 369 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-209ENST00000552329 ADCY7P51828 1080 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 LGALS4P56470 323 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 SESN2P58004 480 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-209ENST00000552329 CCT2P78371 535 aaKnown RBP8.4□□□□□ -1.06
CHPT1-209ENST00000552329 CLEC14AQ86T13 490 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 Q8TCH9 128 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 SAMD11Q96NU1 681 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 FDXACB1Q9BRP7 624 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-209ENST00000552329 HAPLN2Q9GZV7 340 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 C14orf119Q9NWQ9 140 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 TMPRSS11EQ9UL52 423 aa8.4□□□□□ -1.06
CHPT1-209ENST00000552329 ERCC6L2Q5T890 1561 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 ARAP1Q96P48 1450 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 NUP160Q12769 1436 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 PRG4Q92954 1404 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-209ENST00000552329 PATE3B3GLJ2 98 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 GPR39O43194 453 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 ZNF623O75123 536 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 PRKD3O94806 890 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 MGAT5Q09328 741 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 EFEMP1Q12805 493 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 RIN1Q13671 783 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 UIMC1Q96RL1 719 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 GPHA2Q96T91 129 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 QRSL1Q9H0R6 528 aaKnown RBP8.39□□□□□ -1.07
CHPT1-209ENST00000552329 KCTD10Q9H3F6 313 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 CD248Q9HCU0 757 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
CHPT1-209ENST00000552329 A0A1W2PRX2 142 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 MSX2P35548 267 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-209ENST00000552329 UGT8Q16880 541 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 SPATS1Q496A3 300 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 PIK3C3Q8NEB9 887 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 DNERQ8NFT8 737 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 SLC6A15Q9H2J7 730 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 EVLQ9UI08 416 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-209ENST00000552329 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
CHPT1-209ENST00000552329 GAAP10253 952 aa8.37□□□□□ -1.07
CHPT1-209ENST00000552329 XPAP23025 273 aaPredicted RBP8.37□□□□□ -1.07
CHPT1-209ENST00000552329 EVA1CP58658 441 aa8.37□□□□□ -1.07
CHPT1-209ENST00000552329 CDK17Q00537 523 aa8.37□□□□□ -1.07
CHPT1-209ENST00000552329 FOXL1Q12952 345 aa8.37□□□□□ -1.07
CHPT1-209ENST00000552329 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
CHPT1-209ENST00000552329 GRM7Q14831 915 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms