RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 DNAJC7Q99615 494 aa5.38□□□□□ -1.55
USP44-207ENST00000552237 C14orf93Q9H972 538 aaKnown RBP5.38□□□□□ -1.55
USP44-207ENST00000552237 USP35Q9P2H5 1018 aa5.38□□□□□ -1.55
USP44-207ENST00000552237 DNAI1Q9UI46 699 aa5.38□□□□□ -1.55
USP44-207ENST00000552237 INSL6Q9Y581 213 aa5.38□□□□□ -1.55
USP44-207ENST00000552237 COL4A3Q01955 1670 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 CENPVL1A0A0U1RR11 272 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 RASGRP1O95267 797 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 ANTXR2P58335 489 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 IRF9Q00978 393 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 FBXO42Q6P3S6 717 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 LRP10Q7Z4F1 713 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 HDGFL2Q7Z4V5 671 aaPredicted RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 CXorf67Q86X51 503 aaPredicted RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 SLC7A14Q8TBB6 771 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 CELF4Q9BZC1 486 aaKnown RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 ZSWIM4Q9H7M6 989 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 KCMF1Q9P0J7 381 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 ANKFY1Q9P2R3 1169 aa5.37□□□□□ -1.55
USP44-207ENST00000552237 CDK11AQ9UQ88 783 aaPredicted RBP5.37□□□□□ -1.55
USP44-207ENST00000552237 PRLP01236 227 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 ZEB1P37275 1124 aaPredicted RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 NFE2L2Q16236 605 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 CCDC144BQ3MJ40 725 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 SLFN12LQ6IEE8 588 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 CMTR2Q8IYT2 770 aaKnown RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 ZBTB38Q8NAP3 1195 aaPredicted RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 FOXRED1Q96CU9 486 aaPredicted RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 MYEOVQ96EZ4 313 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 MRFAP1L1Q96HT8 127 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 CPPED1Q9BRF8 314 aaPredicted RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 WDR11Q9BZH6 1224 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 ZNF768Q9H5H4 540 aaKnown RBP5.36□□□□□ -1.55
USP44-207ENST00000552237 NDOR1Q9UHB4 597 aa5.36□□□□□ -1.55
USP44-207ENST00000552237 ADCY3O60266 1144 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 LPXNO60711 386 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 FAM153BP0C7A2 387 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 PRAMEF9Q5VWM5 478 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 SP5Q6BEB4 398 aaPredicted RBP5.35□□□□□ -1.55
USP44-207ENST00000552237 SLC46A2Q9BY10 475 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 KCNH6Q9H252 994 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 SYNPO2Q9UMS6 1093 aa5.35□□□□□ -1.55
USP44-207ENST00000552237 UBA6A0AVT1 1052 aaPredicted RBP5.34□□□□□ -1.55
USP44-207ENST00000552237 KRT37O76014 449 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 STC2O76061 302 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 C1RP00736 705 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 HNRNPLP14866 589 aaKnown RBP eCLIP5.34□□□□□ -1.55
USP44-207ENST00000552237 KIR2DL3P43628 341 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 FAM214AQ32MH5 1076 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 FOXB2Q5VYV0 432 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 IQSEC1Q6DN90 963 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
USP44-207ENST00000552237 RPGRQ92834 1020 aaKnown RBP5.34□□□□□ -1.55
USP44-207ENST00000552237 MAML3Q96JK9 1138 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 SPATA5L1Q9BVQ7 753 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 TRPM5Q9NZQ8 1165 aa5.34□□□□□ -1.55
USP44-207ENST00000552237 EFCAB14O75071 495 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 ZFP36P26651 326 aaKnown RBP5.33□□□□□ -1.56
USP44-207ENST00000552237 FNTBP49356 437 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 CCDC62Q6P9F0 684 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 OVCH1Q7RTY7 1134 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 BMP8AQ7Z5Y6 402 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 LILRB2Q8N423 598 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 GLB1L3Q8NCI6 653 aaPredicted RBP5.33□□□□□ -1.56
USP44-207ENST00000552237 MAGEB10Q96LZ2 347 aaPredicted RBP5.33□□□□□ -1.56
USP44-207ENST00000552237 HDAC5Q9UQL6 1122 aa5.33□□□□□ -1.56
USP44-207ENST00000552237 RNASET2O00584 256 aaKnown RBP5.32□□□□□ -1.56
USP44-207ENST00000552237 NRP1O14786 923 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 CXCR5P32302 372 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 ELLP55199 621 aaPredicted RBP5.32□□□□□ -1.56
USP44-207ENST00000552237 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 BOLLQ8N9W6 283 aaKnown RBP5.32□□□□□ -1.56
USP44-207ENST00000552237 EXOC2Q96KP1 924 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 UIMC1Q96RL1 719 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 TUBGCP5Q96RT8 1024 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 DHRS4Q9BTZ2 278 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 PIF1Q9H611 641 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 SLC52A2Q9HAB3 445 aa5.32□□□□□ -1.56
USP44-207ENST00000552237 MRPS23Q9Y3D9 190 aaKnown RBP5.32□□□□□ -1.56
USP44-207ENST00000552237 MAFGO15525 162 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 APOBEC3AP31941 199 aaPredicted RBP5.31□□□□□ -1.56
USP44-207ENST00000552237 KIF11P52732 1056 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 LONRF2Q1L5Z9 754 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 FAM83AQ86UY5 434 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 PRDM13Q9H4Q3 707 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 PCIF1Q9H4Z3 704 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 AKIP1Q9NQ31 210 aa5.31□□□□□ -1.56
USP44-207ENST00000552237 TESQ9UGI8 421 aaKnown RBP5.31□□□□□ -1.56
USP44-207ENST00000552237 MYADML2A6NDP7 307 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 AHRRA9YTQ3 701 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 MTSS1O43312 755 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 NCR1O76036 304 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 NDUFA10O95299 355 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 HKR1P10072 659 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms