RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 PJA1Q8NG27 643 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 PGBD4Q96DM1 585 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 BCO2Q9BYV7 579 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-220ENST00000551716 MAN1C1Q9NR34 630 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-220ENST00000551716 GPR179Q6PRD1 2367 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 LAMTOR5O43504 91 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 LAMP2P13473 410 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 SFPQP23246 707 aaKnown RBP eCLIP17.28■□□□□ 0.36
CACNB3-220ENST00000551716 MCM5P33992 734 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 ADCY7P51828 1080 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 LRRC71Q8N4P6 559 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 FANCBQ8NB91 859 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 FEZF2Q8TBJ5 459 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 BCL7CQ8WUZ0 217 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-220ENST00000551716 TMEM175Q9BSA9 504 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 ZNF577Q9BSK1 485 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 IL25Q9H293 177 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 GABBR1Q9UBS5 961 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 FAN1Q9Y2M0 1017 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 SPTBN2O15020 2390 aa17.28■□□□□ 0.36
CACNB3-220ENST00000551716 EVPLQ92817 2033 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 ANHXE9PGG2 379 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 INPPL1O15357 1258 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 PRC1O43663 620 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 OFD1O75665 1012 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 GLUD1P00367 558 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 URODP06132 367 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 MAGEA9P43362 315 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 SLC11A1P49279 550 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-220ENST00000551716 PTH1RQ03431 593 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-220ENST00000551716 SMG7Q92540 1137 aaKnown RBP17.27■□□□□ 0.36
CACNB3-220ENST00000551716 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-220ENST00000551716 RPS6KC1Q96S38 1066 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 MYADMQ96S97 322 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 VN1R3Q9BXE9 311 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 OSBPL6Q9BZF3 934 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 GBP3Q9H0R5 595 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 PIDD1Q9HB75 910 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 SPATA6Q9NWH7 488 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-220ENST00000551716 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
CACNB3-220ENST00000551716 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.35
CACNB3-220ENST00000551716 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 FAM86B1E9PN63 330 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 PAPLNO95428 1278 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
CACNB3-220ENST00000551716 CYP3A4P08684 503 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 FAM86B2P0C5J1 330 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 FGFR4P22455 802 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 DNM2P50570 870 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 MAML2Q8IZL2 1156 aaPredicted RBP17.26■□□□□ 0.35
CACNB3-220ENST00000551716 PHKBQ93100 1093 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 FAM105AQ9NUU6 356 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 DNAJB4Q9UDY4 337 aa17.26■□□□□ 0.35
CACNB3-220ENST00000551716 KANSL1LA0AUZ9 987 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
CACNB3-220ENST00000551716 TBC1D4O60343 1298 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 SOD2P04179 222 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 OATP04181 439 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 GLULP15104 373 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 AK2P54819 239 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 LPPQ93052 612 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
CACNB3-220ENST00000551716 ZSCAN32Q9NX65 697 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
CACNB3-220ENST00000551716 IGLV3-22A0A075B6J6 115 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 POTEMA6NI47 508 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 WDR64B1ANS9 1081 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 ADRB1P08588 477 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 RXRAP19793 462 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 PRKCQQ04759 706 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 CSTF1Q05048 431 aaKnown RBP17.24■□□□□ 0.35
CACNB3-220ENST00000551716 HTR4Q13639 388 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 RSPO2Q6UXX9 243 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-220ENST00000551716 ZNF410Q86VK4 478 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 ZNF280BQ86YH2 543 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 NELL2Q99435 816 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 FOXQ1Q9C009 403 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 EPC1Q9H2F5 836 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
CACNB3-220ENST00000551716 ZDHHC7Q9NXF8 308 aa17.24■□□□□ 0.35
CACNB3-220ENST00000551716 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms