RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 KCNK18Q7Z418 384 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 OR14C36Q8NHC7 312 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 NKD2Q969F2 451 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 GFM2Q969S9 779 aaKnown RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 MTMR8Q96EF0 704 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 DYDC2Q96IM9 177 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 HIST1H2AHQ96KK5 128 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 CEP89Q96ST8 783 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 HIST1H2AJQ99878 128 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 NOL10Q9BSC4 688 aaKnown RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 SSBP3Q9BWW4 388 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-215ENST00000551391 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
SCAF11-215ENST00000551391 A0A0A6YYK5 440 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 SHTN1A0MZ66 631 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 NRP2O60462 931 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 SEC24DO94855 1032 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 PCDH8O95206 1070 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 KCNQ1P51787 676 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 TRIM25Q14258 630 aaKnown RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 USP10Q14694 798 aaKnown RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 ANO4Q32M45 955 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 ZMAT1Q5H9K5 638 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 KLHDC10Q6PID8 442 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 C1orf162Q8NEQ5 155 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 GAB3Q8WWW8 586 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 LPPQ93052 612 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 FAXDC2Q96IV6 333 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 SOX7Q9BT81 388 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 KLC2Q9H0B6 622 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 VPS11Q9H270 941 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 KCTD10Q9H3F6 313 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 ZNF277Q9NRM2 450 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 CCM2LQ9NUG4 571 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 POLR3BQ9NW08 1133 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-215ENST00000551391 CDC42EP3Q9UKI2 254 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 TNKSO95271 1327 aa4.71□□□□□ -1.66
SCAF11-215ENST00000551391 FZD9O00144 591 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 H2AFYO75367 372 aaKnown RBP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 IARSP41252 1262 aaKnown RBP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 MTNR1BP49286 362 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 MEOX1P50221 254 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 NFYCQ13952 458 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 SPIDRQ14159 915 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 PCOLCEQ15113 449 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 MUM1Q2TAK8 710 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 PLEKHG6Q3KR16 790 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 CRIP3Q6Q6R5 217 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 LARP4Q71RC2 724 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 CIR1Q86X95 450 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 TGFBRAP1Q8WUH2 860 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 FUBP3Q96I24 572 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 PAWRQ96IZ0 340 aaKnown RBP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 WDR92Q96MX6 357 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 OR10A2Q9H208 303 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 PRDM12Q9H4Q4 367 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 SLITRK6Q9H5Y7 841 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 ZDHHC9Q9Y397 364 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 CTDP1Q9Y5B0 961 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-215ENST00000551391 CDY2AQ9Y6F7 541 aa4.7□□□□□ -1.66
SCAF11-215ENST00000551391 PMS2P1A4D2B8 440 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 B4GALT3O60512 393 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 ALDH1L1O75891 902 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 FSBPO95073 299 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 AMHP03971 560 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 SLPIP03973 132 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 LPLP06858 475 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 ZNF888P0CJ79 500 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-215ENST00000551391 XPAP23025 273 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-215ENST00000551391 ACVRL1P37023 503 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 MRE11P49959 708 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 STAT5BP51692 787 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 NEK2P51955 445 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 SLC5A3P53794 718 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 LGALS4P56470 323 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 NRG3P56975 720 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 PPARAQ07869 468 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 AGBL4Q5VU57 503 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 PGM2L1Q6PCE3 622 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 ARHGEF18Q6ZSZ5 1173 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 RALYLQ86SE5 291 aaKnown RBP4.69□□□□□ -1.66
SCAF11-215ENST00000551391 PALM2Q8IXS6 379 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 KBTBD2Q8IY47 623 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 RTKN2Q8IZC4 609 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 UNC5BQ8IZJ1 945 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 AUTS2Q8WXX7 1259 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 CHMP4CQ96CF2 233 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 MSL2Q9HCI7 577 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCAF11-215ENST00000551391 DNAJC28Q9NX36 388 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 MKS1Q9NXB0 559 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 PPP4R1LQ9P1A2 415 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 EVLQ9UI08 416 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-215ENST00000551391 USP18Q9UMW8 372 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 TCAF1Q9Y4C2 921 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 SLC4A7Q9Y6M7 1214 aa4.69□□□□□ -1.66
SCAF11-215ENST00000551391 MYBL2P10244 700 aa4.68□□□□□ -1.66
SCAF11-215ENST00000551391 AGXTP21549 392 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms