RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 EPC2Q52LR7 807 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 CDCA2Q69YH5 1023 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 TWF2Q6IBS0 349 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 MAEAQ7L5Y9 396 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 C5orf67F2Z3F1 127 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 TNFRSF10AO00220 468 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 TSPAN1O60635 241 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 LPXNO60711 386 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 ZNF623O75123 536 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 RB1P06400 928 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 GATMP50440 423 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 GRIN1Q05586 938 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 MICALL1Q8N3F8 863 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 GDPD5Q8WTR4 605 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 TIPINQ9BVW5 301 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 LMCD1Q9NZU5 365 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 KCND2Q9NZV8 630 aa17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 SRPRBQ9Y5M8 271 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 MRPL42Q9Y6G3 142 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-211ENST00000551063 TBKBP1A7MCY6 615 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 RFXAPO00287 272 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 F13A1P00488 732 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 FGFR1P11362 822 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 GUCY2CP25092 1073 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 CTNNB1P35222 781 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 BMPR1AP36894 532 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 SLC39A14Q15043 492 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 AMHR2Q16671 573 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 PAN2Q504Q3 1202 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 NOTUMQ6P988 496 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 SYT2Q8N9I0 419 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 IFT74Q96LB3 600 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 RUSC1Q9BVN2 902 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 MTCH2Q9Y6C9 303 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 PRUNE2Q8WUY3 3088 aa17.06■□□□□ 0.32
PRPF40B-211ENST00000551063 H3BNC9 293 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 CEBPZQ03701 1054 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 BECN1Q14457 450 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
PRPF40B-211ENST00000551063 PHLPP2Q6ZVD8 1323 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 YEATS4O95619 227 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 PLCG1P19174 1290 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 TXLNAP40222 546 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 GPM6BQ13491 265 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 STK38Q15208 465 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 MAPK6Q16659 721 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 NAALADL2Q58DX5 795 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 UBXN11Q5T124 520 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 DAW1Q8N136 415 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 RNF169Q8NCN4 708 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms