RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PAWRQ96IZ0 340 aaKnown RBP6.37□□□□□ -1.39
LIMA1-205ENST00000550592 FAM84AQ96KN4 292 aa6.37□□□□□ -1.39
LIMA1-205ENST00000550592 SLC12A5Q9H2X9 1139 aa6.37□□□□□ -1.39
LIMA1-205ENST00000550592 POLR3BQ9NW08 1133 aaPredicted RBP6.37□□□□□ -1.39
LIMA1-205ENST00000550592 MAGEL2Q9UJ55 1249 aa6.37□□□□□ -1.39
LIMA1-205ENST00000550592 KRT1P04264 644 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 GNALP38405 381 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 KIF23Q02241 960 aaPredicted RBP6.36□□□□□ -1.39
LIMA1-205ENST00000550592 TOP3AQ13472 1001 aaPredicted RBP6.36□□□□□ -1.39
LIMA1-205ENST00000550592 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 MUM1L1Q5H9M0 696 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 TRIM68Q6AZZ1 485 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 B3GNT9Q6UX72 402 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 GLB1L2Q8IW92 636 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 SLC35G2Q8TBE7 412 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 NKD2Q969F2 451 aaPredicted RBP6.36□□□□□ -1.39
LIMA1-205ENST00000550592 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 GREM2Q9H772 168 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 ANLNQ9NQW6 1124 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 SERPINB13Q9UIV8 391 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 CDC42EP3Q9UKI2 254 aa6.36□□□□□ -1.39
LIMA1-205ENST00000550592 HMGXB3Q12766 1538 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 SH3D21A4FU49 640 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 HSPA6P17066 643 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 MCAMP43121 646 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 ETV4P43268 484 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 SLC16A1P53985 500 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 CCT2P78371 535 aaKnown RBP6.35□□□□□ -1.39
LIMA1-205ENST00000550592 SSPNQ14714 243 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 VWA3BQ502W6 1294 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 ATAT1Q5SQI0 421 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 LMBR1LQ6UX01 489 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 PRR18Q8N4B5 295 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 GLB1L3Q8NCI6 653 aaPredicted RBP6.35□□□□□ -1.39
LIMA1-205ENST00000550592 WDR92Q96MX6 357 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 KATNBL1Q9H079 304 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 NMRK2Q9NPI5 230 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 OBP2AQ9NY56 170 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 GABBR1Q9UBS5 961 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 VWA7Q9Y334 891 aa6.35□□□□□ -1.39
LIMA1-205ENST00000550592 A0A1W2PR48 441 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 DDX3XO00571 662 aaKnown RBP eCLIP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 ERC2O15083 957 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 CAND2O75155 1236 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 FARP2O94887 1054 aaPredicted RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 FSBPO95073 299 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 PI3P19957 117 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 PDCP20941 246 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 EDNRBP24530 442 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 KCNQ1P51787 676 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 CD69Q07108 199 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 PPP3CAQ08209 521 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 IFIT1BQ5T764 474 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 CCSAPQ6IQ19 270 aaPredicted RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 ATG14Q6ZNE5 492 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 DGKHQ86XP1 1220 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 ZNF526Q8TF50 670 aaPredicted RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 HPS3Q969F9 1004 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 YTHDC1Q96MU7 727 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 GTPBP4Q9BZE4 634 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 SAP30BPQ9UHR5 308 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 DNAI1Q9UI46 699 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 CNOT6Q9ULM6 557 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 LIMCH1Q9UPQ0 1083 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 SMG5Q9UPR3 1016 aaKnown RBP6.34□□□□□ -1.39
LIMA1-205ENST00000550592 IPPQ9Y573 584 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
LIMA1-205ENST00000550592 CCDC194A0A1B0GVG4 234 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 VSTM5A8MXK1 200 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 HTRA2O43464 458 aaPredicted RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 AP1G1O43747 822 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 OFD1O75665 1012 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 LY86O95711 162 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 GSPT1P15170 499 aaKnown RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 SESN2P58004 480 aaPredicted RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 MEF2AQ02078 507 aaPredicted RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 MGAT5Q09328 741 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 LILRA6Q6PI73 481 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 Q6ZUG5 572 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 USP45Q70EL2 814 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 REXO1L1PQ8IX06 675 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 IFNL2Q8IZJ0 200 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 BHLHE22Q8NFJ8 381 aaPredicted RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 GPR156Q8NFN8 814 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 NRG4Q8WWG1 115 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 RUNDC1Q96C34 613 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 LRGUKQ96M69 825 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 TAAR9Q96RI9 348 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 ADI1Q9BV57 179 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 PRDM11Q9NQV5 511 aa6.33□□□□□ -1.4
LIMA1-205ENST00000550592 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
LIMA1-205ENST00000550592 SLC52A1Q9NWF4 448 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms