RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CATSPER4Q7RTX7 472 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 OXER1Q8TDS5 423 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 LPPQ93052 612 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 CDCA3Q99618 268 aaPredicted RBP14.99□□□□□ -0.01
NUP188-211ENST00000550219 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 VAV3Q9UKW4 847 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 INPP5FQ9Y2H2 1132 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 ZDHHC9Q9Y397 364 aa14.99□□□□□ -0.01
NUP188-211ENST00000550219 A0A0U1RQF3 1178 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 VPS37CA5D8V6 355 aaPredicted RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 HIDE1A8MVS5 230 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 NT5C1B-RDH14C9J2C7 533 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 ZC3H11AO75152 810 aaKnown RBP eCLIP14.98□□□□□ -0.01
NUP188-211ENST00000550219 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 ZSCAN22P10073 491 aaPredicted RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 TECP42680 631 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 POLGP54098 1239 aaPredicted RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 NPEPPSP55786 919 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 NUCB2P80303 420 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 PLCB3Q01970 1234 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 KRT17Q04695 432 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 PPP2R5CQ13362 524 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 PDE12Q6L8Q7 609 aaKnown RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 TMC7Q7Z402 723 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 ZNF410Q86VK4 478 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 CEP89Q96ST8 783 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 MRPL9Q9BYD2 267 aaKnown RBP14.98□□□□□ -0.01
NUP188-211ENST00000550219 KCNMB3Q9NPA1 279 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 CYP26B1Q9NR63 512 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 SPG21Q9NZD8 308 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 LZTS1Q9Y250 596 aa14.98□□□□□ -0.01
NUP188-211ENST00000550219 IGKV6-21A0A0C4DH24 114 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 FSD2A1L4K1 749 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 GCFC2P16383 781 aaKnown RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 PHKA2P46019 1235 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 QARSP47897 775 aaKnown RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 RESTQ13127 1097 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 NR5A1Q13285 461 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 ZNF598Q86UK7 904 aaKnown RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 SLC39A11Q8N1S5 342 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 CEP170P1Q96L14 293 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 FAM20AQ96MK3 541 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 JPH2Q9BR39 696 aaPredicted RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 LXNQ9BS40 222 aa14.97□□□□□ -0.01
NUP188-211ENST00000550219 INO80BQ9C086 356 aaPredicted RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 WRAP73Q9P2S5 460 aaPredicted RBP14.97□□□□□ -0.01
NUP188-211ENST00000550219 DKC1O60832 514 aaKnown RBP eCLIP14.96□□□□□ -0.01
NUP188-211ENST00000550219 EOMESO95936 686 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 BCAR1P56945 870 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 CYP4A11Q02928 519 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 SMC1AQ14683 1233 aaKnown RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 HERC4Q5GLZ8 1057 aaPredicted RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 EARS2Q5JPH6 523 aaKnown RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 ZNF579Q8NAF0 562 aaKnown RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 TMEM143Q96AN5 459 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 TMEM169Q96HH4 297 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 DYDC2Q96IM9 177 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 GBP3Q9H0R5 595 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 ZSCAN16Q9H4T2 348 aaPredicted RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 NGRNQ9NPE2 291 aaKnown RBP14.96□□□□□ -0.01
NUP188-211ENST00000550219 CHST12Q9NRB3 414 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 FAM105AQ9NUU6 356 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 COL4A3BPQ9Y5P4 624 aa14.96□□□□□ -0.01
NUP188-211ENST00000550219 MEIS3P2A8K0S8 358 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 F13A1P00488 732 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 P4HBP07237 508 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 ALDH7A1P49419 539 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 RNASELQ05823 741 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 MCTP1Q6DN14 999 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 ANKRD54Q6NXT1 300 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 GLB1LQ6UWU2 654 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 BRAPQ7Z569 592 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 HAS1Q92839 578 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 NAP1L4Q99733 375 aaKnown RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
NUP188-211ENST00000550219 RGL1Q9NZL6 768 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
NUP188-211ENST00000550219 ARID2Q68CP9 1835 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 LOC730098B7Z3J9 87 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 BAG4O95429 457 aaKnown RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 SRGAP2CP0DJJ0 459 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 SKIP12755 728 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 YWHABP31946 246 aaKnown RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 RAB27AP51159 221 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 CBX2Q14781 532 aaPredicted RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 EMC2Q15006 297 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms