RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 YEATS4O95619 227 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 AXLP30530 894 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 NAMPTP43490 491 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 ATL3Q6DD88 541 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 ECHDC2Q86YB7 292 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 DEPTORQ8TB45 409 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 PLIN2Q99541 437 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 CCSER1Q9C0I3 900 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 KCND2Q9NZV8 630 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 CCDC39Q9UFE4 941 aa28.72■■■□□ 2.19
CPSF6-205ENST00000550075 EOMESO95936 686 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 PLA2G4BP0C869 781 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 MBTD1Q05BQ5 628 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 SYT2Q8N9I0 419 aaPredicted RBP28.71■■■□□ 2.19
CPSF6-205ENST00000550075 LINC00301Q8NCQ3 95 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 CCDC51Q96ER9 411 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 MTUS1Q9ULD2 1270 aa28.71■■■□□ 2.19
CPSF6-205ENST00000550075 COL4A4P53420 1690 aaPredicted RBP28.7■■■□□ 2.19
CPSF6-205ENST00000550075 SPTLC2O15270 562 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 PLCG1P19174 1290 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 GUCY2CP25092 1073 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 PKP1Q13835 747 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 KARSQ15046 597 aaKnown RBP28.7■■■□□ 2.18
CPSF6-205ENST00000550075 CDCA2Q69YH5 1023 aaPredicted RBP28.7■■■□□ 2.18
CPSF6-205ENST00000550075 RINT1Q6NUQ1 792 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 ABI1Q8IZP0 508 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 RNF169Q8NCN4 708 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 FBXO22Q8NEZ5 403 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 RUSC1Q9BVN2 902 aa28.7■■■□□ 2.18
CPSF6-205ENST00000550075 PRMT7Q9NVM4 692 aaPredicted RBP28.7■■■□□ 2.18
CPSF6-205ENST00000550075 PAN2Q504Q3 1202 aaKnown RBP28.69■■■□□ 2.18
CPSF6-205ENST00000550075 NOTUMQ6P988 496 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 C1orf186Q6ZWK4 172 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 RSPH1Q8WYR4 309 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 SYMPKQ92797 1274 aaKnown RBP28.69■■■□□ 2.18
CPSF6-205ENST00000550075 PRIMPOLQ96LW4 560 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 TFIP11Q9UBB9 837 aaKnown RBP28.69■■■□□ 2.18
CPSF6-205ENST00000550075 CFAP45Q9UL16 551 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 CHD7Q9P2D1 2997 aa28.69■■■□□ 2.18
CPSF6-205ENST00000550075 FNDC1Q4ZHG4 1894 aaPredicted RBP28.68■■■□□ 2.18
CPSF6-205ENST00000550075 GTPBP6O43824 516 aaPredicted RBP28.68■■■□□ 2.18
CPSF6-205ENST00000550075 TSPAN1O60635 241 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 HIP1RO75146 1068 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 PPP6R2O75170 966 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 CTNNB1P35222 781 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 SLC12A3P55017 1021 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 DMP1Q13316 513 aaPredicted RBP28.68■■■□□ 2.18
CPSF6-205ENST00000550075 TMEM192Q8IY95 271 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 BSNDQ8WZ55 320 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 CLIC6Q96NY7 704 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 C17orf80Q9BSJ5 609 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 TMEM117Q9H0C3 514 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 C17orf75Q9HAS0 396 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 FAM105AQ9NUU6 356 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 PHLPP2Q6ZVD8 1323 aa28.68■■■□□ 2.18
CPSF6-205ENST00000550075 TBKBP1A7MCY6 615 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 IGFBP4P22692 258 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 EFNA5P52803 228 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 MAPK6Q16659 721 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 FOXD4L6Q3SYB3 417 aaPredicted RBP28.67■■■□□ 2.18
CPSF6-205ENST00000550075 FOXD4L3Q6VB84 417 aaPredicted RBP28.67■■■□□ 2.18
CPSF6-205ENST00000550075 SPRED2Q7Z698 418 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 KCNG4Q8TDN1 519 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 CLP1Q92989 425 aaKnown RBP28.67■■■□□ 2.18
CPSF6-205ENST00000550075 PGBD4Q96DM1 585 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 EPSTI1Q96J88 318 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 STK17AQ9UEE5 414 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 KCNG1Q9UIX4 513 aa28.67■■■□□ 2.18
CPSF6-205ENST00000550075 BRD1O95696 1058 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 FGFR1P11362 822 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 GATMP50440 423 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 EPC2Q52LR7 807 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 SPECC1Q5M775 1068 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 PPP4R3CPQ6ZMV5 832 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 ZNF598Q86UK7 904 aaKnown RBP28.66■■■□□ 2.18
CPSF6-205ENST00000550075 LARP4BQ92615 738 aaKnown RBP28.66■■■□□ 2.18
CPSF6-205ENST00000550075 RAD54LQ92698 747 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 DAXXQ9UER7 740 aaPredicted RBP28.66■■■□□ 2.18
CPSF6-205ENST00000550075 ATP6V1DQ9Y5K8 247 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 MRPL42Q9Y6G3 142 aaKnown RBP28.66■■■□□ 2.18
CPSF6-205ENST00000550075 MYH11P35749 1972 aa28.66■■■□□ 2.18
CPSF6-205ENST00000550075 EPOPA6NHQ4 379 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 ZNF623O75123 536 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 RB1P06400 928 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 HOXA11P31270 313 aaPredicted RBP28.65■■■□□ 2.18
CPSF6-205ENST00000550075 AMHR2Q16671 573 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 FAM187BQ17R55 369 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 TMEM132AQ24JP5 1023 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 GPBP1Q86WP2 473 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 CNNM3Q8NE01 707 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 GDPD5Q8WTR4 605 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 CDH23Q9H251 3354 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 CNTNAP2Q9UHC6 1331 aa28.65■■■□□ 2.18
CPSF6-205ENST00000550075 PRKCBP05771 671 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 ATF7P17544 494 aaPredicted RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 PEX3P56589 373 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 ADGRE1Q14246 886 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 SPOUT1Q5T280 376 aaKnown RBP28.64■■■□□ 2.18
CPSF6-205ENST00000550075 RRAGBQ5VZM2 374 aa28.64■■■□□ 2.18
CPSF6-205ENST00000550075 CCDC73Q6ZRK6 1079 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms