RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
CNOT2-220ENST00000549750 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
CNOT2-220ENST00000549750 GTF3C6Q969F1 213 aa15.33■□□□□ 0.04
CNOT2-220ENST00000549750 NKD2Q969F2 451 aaPredicted RBP15.33■□□□□ 0.04
CNOT2-220ENST00000549750 SCLT1Q96NL6 688 aa15.33■□□□□ 0.04
CNOT2-220ENST00000549750 CYP26B1Q9NR63 512 aa15.33■□□□□ 0.04
CNOT2-220ENST00000549750 GJB4Q9NTQ9 266 aa15.33■□□□□ 0.04
CNOT2-220ENST00000549750 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.04
CNOT2-220ENST00000549750 TPRP12270 2363 aaKnown RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 ARID2Q68CP9 1835 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 A0A087WZ62 844 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 DDX11L8A8MPP1 907 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 IBSPP21815 317 aaPredicted RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 ERVFC1P60507 584 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 SPIRE1Q08AE8 756 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 KCNC3Q14003 757 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 EPHA7Q15375 998 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 DUSP6Q16828 381 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 KCNT2Q6UVM3 1135 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 TMEM184AQ6ZMB5 413 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 SUSD6Q92537 303 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 ZNF668Q96K58 619 aaPredicted RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 FDXACB1Q9BRP7 624 aaPredicted RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 TLE6Q9H808 572 aa15.32■□□□□ 0.04
CNOT2-220ENST00000549750 SUCLA2Q9P2R7 463 aaPredicted RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
CNOT2-220ENST00000549750 CARNS1A5YM72 827 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 GAS2O43903 313 aaKnown RBP15.31■□□□□ 0.04
CNOT2-220ENST00000549750 CCNT1O60563 726 aaKnown RBP15.31■□□□□ 0.04
CNOT2-220ENST00000549750 ZNF623O75123 536 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 SKIP12755 728 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 RFC5P40937 340 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 ME3Q16798 604 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 EARS2Q5JPH6 523 aaKnown RBP15.31■□□□□ 0.04
CNOT2-220ENST00000549750 ADSSL1Q8N142 457 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 SLC7A3Q8WY07 619 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 ZNF558Q96NG5 402 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 SH2D3AQ9BRG2 576 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
CNOT2-220ENST00000549750 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
CNOT2-220ENST00000549750 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
CNOT2-220ENST00000549750 ZNF292O60281 2723 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 FGFR4P22455 802 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 KRT2P35908 639 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 PHKA2P46019 1235 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 RAB27AP51159 221 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 PLA2G4FQ68DD2 849 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 FRMD5Q7Z6J6 570 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 RHPN2Q8IUC4 686 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 SLC39A11Q8N1S5 342 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 NSUN7Q8NE18 718 aaKnown RBP15.3■□□□□ 0.04
CNOT2-220ENST00000549750 MICAL1Q8TDZ2 1067 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 LXNQ9BS40 222 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 BRMS1Q9HCU9 246 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 SPG21Q9NZD8 308 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 NCOR2Q9Y618 2525 aa15.3■□□□□ 0.04
CNOT2-220ENST00000549750 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
CNOT2-220ENST00000549750 LYPLA2O95372 231 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 LARGE1O95461 756 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 YWHABP31946 246 aaKnown RBP15.29■□□□□ 0.04
CNOT2-220ENST00000549750 NPEPPSP55786 919 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 KRT17Q04695 432 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 NR5A1Q13285 461 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 UBALD2Q8IYN6 164 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 TMEM105Q8N8V8 129 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 VN1R2Q8NFZ6 395 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 PSPC1Q8WXF1 523 aaKnown RBP15.29■□□□□ 0.04
CNOT2-220ENST00000549750 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 TCF25Q9BQ70 676 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 ZSWIM4Q9H7M6 989 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 AGPAT5Q9NUQ2 364 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
CNOT2-220ENST00000549750 CACNA1GO43497 2377 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 FAM205CA6NFA0 338 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 ASAP2O43150 1006 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 SRGAP2BP0DMP2 458 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 POLGP54098 1239 aaPredicted RBP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 NECAB1Q8N987 351 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 KREMEN2Q8NCW0 462 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 HELQQ8TDG4 1101 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
CNOT2-220ENST00000549750 PIN4Q9Y237 131 aaKnown RBP15.28■□□□□ 0.04
CNOT2-220ENST00000549750 PER2O15055 1255 aa15.27■□□□□ 0.04
CNOT2-220ENST00000549750 MARCH6O60337 910 aa15.27■□□□□ 0.04
CNOT2-220ENST00000549750 ALDH7A1P49419 539 aaKnown RBP15.27■□□□□ 0.04
CNOT2-220ENST00000549750 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms