RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 GOLGA8IPA6NC78 632 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 GOLGA8JA6NMD2 632 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 VWA5AO00534 786 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ATP2A1O14983 1001 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 DAPK3O43293 454 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 FKBP3Q00688 224 aaKnown RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ZKSCAN4Q969J2 545 aaPredicted RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 MXRA8Q9BRK3 442 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 PICK1Q9NRD5 415 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ATP8A1Q9Y2Q0 1164 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 RPS6KA1Q15418 735 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 ZNF473Q8WTR7 871 aaKnown RBP12.03□□□□□ -0.48
LINC00661-204ENST00000549354 GLG1Q92896 1179 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 RIT2Q99578 217 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
LINC00661-204ENST00000549354 A0A1W2PQJ5 194 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 GRID2IPA4D2P6 1211 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 EML1O00423 815 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 NFIBO00712 420 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 ZBED4O75132 1171 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 LRRC63Q05C16 580 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 DGKZQ13574 1117 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 TRIP13Q15645 432 aaPredicted RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 PCNX4Q63HM2 1172 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 SYCP3Q8IZU3 236 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 KIRREL3Q8IZU9 778 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 IQCKQ8N0W5 287 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 PIK3R5Q8WYR1 880 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 EIF2AK1Q9BQI3 630 aaKnown RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 NEUROG2Q9H2A3 272 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 ADARB2Q9NS39 739 aaKnown RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 AFG3L2Q9Y4W6 797 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 LOC285556D6RIA3 1793 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 WDR90Q96KV7 1748 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 MYPNQ86TC9 1320 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 KRIT1O00522 736 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 CETN3O15182 167 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 USP2O75604 605 aaPredicted RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 FLOT1O75955 427 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 EPC2Q52LR7 807 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 OTUD6AQ7L8S5 288 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.49
LINC00661-204ENST00000549354 DNM3Q9UQ16 869 aa12.02□□□□□ -0.49
LINC00661-204ENST00000549354 PPP1R37O75864 691 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 EYA4O95677 639 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 DSG3P32926 999 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SSR1P43307 286 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SPRED3Q2MJR0 410 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 PEX26Q7Z412 305 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 NLRP14Q86W24 1093 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 CPNE8Q86YQ8 564 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 CCDC65Q8IXS2 484 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ZC3H3Q8IXZ2 948 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 TTI1O43156 1089 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 HP1BP3Q5SSJ5 553 aaPredicted RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 LRCH2Q5VUJ6 765 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 DAB2IPQ5VWQ8 1189 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ALKBH5Q6P6C2 394 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 GBP6Q6ZN66 633 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 GOLGA6L7A0A1B0GV03 622 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 MEFVO15553 781 aaPredicted RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SART1O43290 800 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 TBCAO75347 108 aaKnown RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SLITRK3O94933 977 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 SERPING1P05155 500 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ITGB5P18084 799 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 HSD17B3P37058 310 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 GIT2Q14161 759 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 E2F5Q15329 346 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 EXOC3L4Q17RC7 722 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ASTE1Q2TB18 679 aaPredicted RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 FIGNQ5HY92 759 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF571Q7Z3V5 609 aaPredicted RBP12.01□□□□□ -0.49
LINC00661-204ENST00000549354 MYCBPAPQ8TBZ2 947 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms