RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ESYT2A0FGR8 921 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 ZBTB42B2RXF5 422 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 SPTLC1O15269 473 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 DHX15O43143 795 aaKnown RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 CCNE2O96020 404 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 PSMA5P28066 241 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX54-206ENST00000549271 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 ZNF484Q5JVG2 852 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 FAM160B1Q5W0V3 765 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 TMEM87AQ8NBN3 555 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 GPR152Q8TDT2 470 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 PPP1R16BQ96T49 567 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 NCDNQ9UBB6 729 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
DDX54-206ENST00000549271 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
DDX54-206ENST00000549271 CCDC196A0A1B0GTZ2 297 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 DCDC2BA2VCK2 349 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 FAM86B1E9PN63 330 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 FAM86B2P0C5J1 330 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 TGM1P22735 817 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 ZNF76P36508 570 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 CLCN4P51793 760 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 EVCP57679 992 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 FGD1P98174 961 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 LMNB2Q03252 620 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
DDX54-206ENST00000549271 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
DDX54-206ENST00000549271 PJA1Q8NG27 643 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
DDX54-206ENST00000549271 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
DDX54-206ENST00000549271 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.21
DDX54-206ENST00000549271 NID2Q14112 1375 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 C22orf31O95567 290 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 VTNP04004 478 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 ZSCAN20P17040 1043 aaPredicted RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 ATP4AP20648 1035 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 NTRK3Q16288 839 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 MIS18BP1Q6P0N0 1132 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 PLA2G4DQ86XP0 818 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 BCL7CQ8WUZ0 217 aaPredicted RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 RHOBTB2Q9BYZ6 727 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 WDR6Q9NNW5 1121 aaKnown RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 TBC1D22BQ9NU19 505 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 FBXO4Q9UKT5 387 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 MAFBQ9Y5Q3 323 aaPredicted RBP13.76□□□□□ -0.21
DDX54-206ENST00000549271 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
DDX54-206ENST00000549271 IPO5O00410 1097 aaKnown RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 BACH1O14867 736 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 STARD6P59095 220 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 JAKMIP3Q5VZ66 844 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 ZNF746Q6NUN9 644 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 SMAP1Q8IYB5 467 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
DDX54-206ENST00000549271 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 MYADMQ96S97 322 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 SLC2A4RGQ9NR83 387 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 PCDHGA2Q9Y5H1 932 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 FRYQ5TBA9 3013 aa13.75□□□□□ -0.21
DDX54-206ENST00000549271 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
DDX54-206ENST00000549271 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 PRPF3O43395 683 aaKnown RBP13.74□□□□□ -0.21
DDX54-206ENST00000549271 LILRB3O75022 631 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 LILRB5O75023 590 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX54-206ENST00000549271 LRRN2O75325 713 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 CIITAP33076 1130 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 SWSAP1Q6NVH7 229 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 NELL1Q92832 810 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 EPC1Q9H2F5 836 aa13.74□□□□□ -0.21
DDX54-206ENST00000549271 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms