RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	FSD2	A1L4K1	749 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	SRGAP2C	P0DJJ0	459 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	GJA8	P48165	433 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	MNX1	P50219	401 aa	Predicted RBP	13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	PMS1	P54277	932 aa	Known RBP	13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	STX17	P56962	302 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	CDC42EP1	Q00587	391 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	LRRC63	Q05C16	580 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	KCNA1	Q09470	495 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	NCAPH	Q15003	741 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	ZCWPW2	Q504Y3	356 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	TTI2	Q6NXR4	508 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	TAS1R3	Q7RTX0	852 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	LUZP1	Q86V48	1076 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	SERINC5	Q86VE9	423 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	MAP4K3	Q8IVH8	894 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	NLRP4	Q96MN2	994 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	ACCS	Q96QU6	501 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	NFKBIZ	Q9BYH8	718 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	C2orf40	Q9H1Z8	148 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	TBX20	Q9UMR3	447 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	CIT	O14578	2027 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	TRIP11	Q15643	1979 aa		13.45	□□□□□ -0.26
ERBB3-208	ENST00000549205	PHLPP2	Q6ZVD8	1323 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	TRIM49B	A6NDI0	452 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	GOLGA6L3	A6NEY3	463 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	SMTNL1	A8MU46	457 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	BECN2	A8MW95	431 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ARVCF	O00192	962 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	PDXK	O00764	312 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	RPLP2	P05387	115 aa	Known RBP	13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	CAPN2	P17655	700 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	PHKA2	P46019	1235 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	GPC3	P51654	580 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	NLRP11	P59045	1033 aa	Known RBP	13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	PTEN	P60484	403 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	PTGIS	Q16647	500 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	SPATA1	Q5VX52	437 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ANKRD40	Q6AI12	368 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	RPAIN	Q86UA6	219 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ZNF410	Q86VK4	478 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ZBTB8OS	Q8IWT0	167 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ZNF710	Q8N1W2	664 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	NME8	Q8N427	588 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ANKLE1	Q8NAG6	615 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	DNAJB3	Q8WWF6	145 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	CTAGE1	Q96RT6	745 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	TSG101	Q99816	390 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	DUSP9	Q99956	384 aa	Known RBP	13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	CCDC113	Q9H0I3	377 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	ADAMTS10	Q9H324	1103 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	TMEM134	Q9H6X4	195 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	TMEM206	Q9H813	350 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	TYW1	Q9NV66	732 aa	Known RBP	13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205	EXOC7	Q9UPT5	735 aa		13.44	□□□□□ -0.26
ERBB3-208	ENST00000549205		A0A087WZ62	844 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	GOLGA6L19	H0YKK7	550 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205		K7ERI5	159 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	GPR32	O75388	356 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	CDK7	P50613	346 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	STRN3	Q13033	797 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	PTK7	Q13308	1070 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	PPP4R3CP	Q6ZMV5	832 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	HS2ST1	Q7LGA3	356 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	SYCP3	Q8IZU3	236 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	GOLGA5	Q8TBA6	731 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	NLRP7	Q8WX94	980 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	ZNF668	Q96K58	619 aa	Predicted RBP	13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	SCLT1	Q96NL6	688 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	TMEM106C	Q9BVX2	250 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	GBP3	Q9H0R5	595 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	IFT122	Q9HBG6	1241 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	TRMT13	Q9NUP7	481 aa	Known RBP	13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	TRAF3IP3	Q9Y228	551 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	NFE2L3	Q9Y4A8	694 aa		13.43	□□□□□ -0.26
ERBB3-208	ENST00000549205	ANK1	P16157	1881 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	TET1	Q8NFU7	2136 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	TGFB1I1	O43294	461 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	CALU	O43852	315 aa	Predicted RBP	13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	PIGR	P01833	764 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	COL6A1	P12109	1028 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	SNRPF	P62306	86 aa	Known RBP	13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	MRPS6	P82932	125 aa	Known RBP	13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	MBTD1	Q05BQ5	628 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	TMEM62	Q0P6H9	643 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	MAPK6	Q16659	721 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	TPD52L1	Q16890	204 aa	Predicted RBP	13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	KIZ	Q2M2Z5	673 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	EDRF1	Q3B7T1	1238 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	SRGAP1	Q7Z6B7	1085 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	RSPH3	Q86UC2	560 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	CSGALNACT2	Q8N6G5	542 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	WNT8B	Q93098	351 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	PPP1R16B	Q96T49	567 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	TRPV6	Q9H1D0	765 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	HSD3B7	Q9H2F3	369 aa		13.42	□□□□□ -0.26
ERBB3-208	ENST00000549205	IKZF4	Q9H2S9	585 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms