RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 CNPY4Q8N129 248 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 LXNQ9BS40 222 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 HIP1RO75146 1068 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 PTENP60484 403 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 ACTN3Q08043 901 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 BFSP1Q12934 665 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 PHLDB2Q86SQ0 1253 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 NENFQ9UMX5 172 aa12.89□□□□□ -0.35
RAPGEF3-219ENST00000549151 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 PRELPP51888 382 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 STAT2P52630 851 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 PMS2P54278 862 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 PPATQ06203 517 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 CCDC105Q8IYK2 499 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 UNC45AQ9H3U1 944 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 INTUQ9ULD6 942 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 FSBPO95073 299 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 CHN1P15882 459 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 GKAP1Q5VSY0 366 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 SEPT12Q8IYM1 358 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 MGARPQ8TDB4 240 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
RAPGEF3-219ENST00000549151 SPOPO43791 374 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CIITAP33076 1130 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 NPEPPSP55786 919 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 POU5F1Q01860 360 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CARD9Q9H257 536 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 MYH11P35749 1972 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 DNM1LO00429 736 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 PSMD10O75832 226 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CLSTN1O94985 981 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 COMTP21964 271 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 GGT7Q9UJ14 662 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 SGPL1O95470 568 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CALCAP01258 141 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 MMEP08473 750 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 BCRP11274 1271 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 SNX1Q13596 522 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 EPS8L3Q8TE67 593 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 FAM84AQ96KN4 292 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 SLC40A1Q9NP59 571 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 KLC4Q9NSK0 619 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-219ENST00000549151 ECE2O60344 883 aa12.86□□□□□ -0.35
RAPGEF3-219ENST00000549151 ANXA13P27216 316 aa12.86□□□□□ -0.35
RAPGEF3-219ENST00000549151 RPL21P46778 160 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-219ENST00000549151 MAP2K1Q02750 393 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-219ENST00000549151 MAPK7Q13164 816 aa12.86□□□□□ -0.35
RAPGEF3-219ENST00000549151 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms