RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PTGIRP43119 386 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 MARCKSL1P49006 195 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 KCNJ2P63252 427 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 SPIRE1Q08AE8 756 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 FLAD1Q8NFF5 587 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 TBC1D16Q8TBP0 767 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 NSMCE1Q8WV22 266 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 SYT11Q9BT88 431 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 MXD3Q9BW11 206 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 CCDC134Q9H6E4 229 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 GTPBP10A4D1E9 387 aaKnown RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 ZBTB5O15062 677 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 RPL13P26373 211 aaKnown RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 ADCY2Q08462 1091 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 PICALMQ13492 652 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 PPP2R5EQ16537 467 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 SYT2Q8N9I0 419 aaPredicted RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 KRT35Q92764 455 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 ANO3Q9BYT9 981 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 EBF2Q9HAK2 575 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 RASAL2Q9UJF2 1139 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 DNAJC12Q9UKB3 198 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 IGKV6D-41A0A0C4DH26 115 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 CLGNO14967 610 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 SPATA31C1P0DKV0 1188 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 BMT2Q1RMZ1 405 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 C6orf118Q5T5N4 469 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 CRELD2Q6UXH1 353 aaPredicted RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 ZDHHC14Q8IZN3 488 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 PRELID2Q8N945 189 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 AGAP11Q8TF27 550 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 THOC1Q96FV9 657 aaKnown RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 BORCS6Q96GS4 357 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 RUSC1Q9BVN2 902 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 GPR88Q9GZN0 384 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 DBR1Q9UK59 544 aaKnown RBP14.82□□□□□ -0.04
HDAC7-228ENST00000548938 DNM3Q9UQ16 869 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 MYO3BQ8WXR4 1341 aa14.82□□□□□ -0.04
HDAC7-228ENST00000548938 CFAP73A6NFT4 308 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 PPEF1O14829 653 aaPredicted RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 TGFB1I1O43294 461 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 PHF2O75151 1096 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 PLCG2P16885 1265 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 POLD1P28340 1107 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 DRG2P55039 364 aaKnown RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 NCALDP61601 193 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 CYP4A11Q02928 519 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 RIPK1Q13546 671 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 LRRC14Q15048 493 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 CNGA2Q16280 664 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 PRR16Q569H4 304 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 HOOK2Q96ED9 719 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 NSRP1Q9H0G5 558 aaKnown RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 SFI1A8K8P3 1242 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 ANKRD63C9JTQ0 380 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 SNX3O60493 162 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 TTLL1O95922 423 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 RARAP10276 462 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 IL1R1P14778 569 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 AUHQ13825 339 aaKnown RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 SP8Q8IXZ3 490 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 FAM186BQ8IYM0 893 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 ETNPPLQ8TBG4 499 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 RSRC1Q96IZ7 334 aaKnown RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 NAP1L4Q99733 375 aaKnown RBP14.81□□□□□ -0.04
HDAC7-228ENST00000548938 STK33Q9BYT3 514 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 BHMT2Q9H2M3 363 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 C15orf41Q9Y2V0 281 aa14.81□□□□□ -0.04
HDAC7-228ENST00000548938 CCDC189A1A4V9 331 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 C6orf229H3BNL8 230 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 RIPK2O43353 540 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 RTN2O75298 545 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ANP32DO95626 131 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 NQO1P15559 274 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ALDH5A1P51649 535 aaPredicted RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 P2RX7Q99572 595 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 CNOT7Q9UIV1 285 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ALG6Q9Y672 507 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ZMYM2Q9UBW7 1377 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ANKRD31Q8N7Z5 1873 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 TMEM110-MUSTN1A8MSY1 372 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 RASGRF2O14827 1237 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 TBCAO75347 108 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 NEBLO76041 1014 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 OAS1P00973 400 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 RPA1P27694 616 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 GABPAQ06546 454 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 ZNF268Q14587 947 aaPredicted RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 CBWD6Q4V339 395 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 CBWD3Q5JTY5 395 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 CBWD5Q5RIA9 395 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 OTUD6AQ7L8S5 288 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 SLFN12Q8IYM2 578 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 PRCCQ92733 491 aaPredicted RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 FGFR1OP2Q9NVK5 253 aa14.8□□□□□ -0.04
HDAC7-228ENST00000548938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 MTRF1LQ9UGC7 380 aaKnown RBP14.8□□□□□ -0.04
HDAC7-228ENST00000548938 PCDHA3Q9Y5H8 950 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms