RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 COL4A3Q01955 1670 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
CNOT2-215ENST00000548863 HNRNPLP14866 589 aaKnown RBP eCLIP6.66□□□□□ -1.343e-6■□□□□ 8.5
CNOT2-215ENST00000548863 NR4A1P22736 598 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 LY6G5CQ5SRR4 150 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 PHYKPLQ8IUZ5 450 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 CLUHP3Q96NS8 147 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 ENKD1Q9H0I2 346 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 TNFRSF18Q9Y5U5 241 aa6.66□□□□□ -1.34
CNOT2-215ENST00000548863 A0A0A6YYK5 440 aaPredicted RBP6.65□□□□□ -1.34
CNOT2-215ENST00000548863 FSBPO95073 299 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 RAPGEF3O95398 923 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 GNAT2P19087 354 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 ADCY2Q08462 1091 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 FSTL1Q12841 308 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 TIGD7Q6NT04 549 aaPredicted RBP6.65□□□□□ -1.34
CNOT2-215ENST00000548863 LRRC55Q6ZSA7 311 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 LILRB2Q8N423 598 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 SOX7Q9BT81 388 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 MLST8Q9BVC4 326 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 SPO11Q9Y5K1 396 aa6.65□□□□□ -1.34
CNOT2-215ENST00000548863 TRIM24O15164 1050 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
CNOT2-215ENST00000548863 OPHN1O60890 802 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
CNOT2-215ENST00000548863 TAP1Q03518 808 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 PTPAQ15257 358 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 VRK3Q8IV63 474 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 MB21D1Q8N884 522 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 PROKR1Q8TCW9 393 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 PGBD4Q96DM1 585 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 ORAI3Q9BRQ5 295 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 MTG2Q9H4K7 406 aa6.64□□□□□ -1.35
CNOT2-215ENST00000548863 CBX4O00257 560 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 NRP1O14786 923 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 DNAJC8O75937 253 aaPredicted RBP6.63□□□□□ -1.35
CNOT2-215ENST00000548863 RECQL4O94761 1208 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 PRPF6O94906 941 aaKnown RBP6.63□□□□□ -1.35
CNOT2-215ENST00000548863 ABHD16AO95870 558 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 ESRP1Q6NXG1 681 aaKnown RBP6.63□□□□□ -1.35
CNOT2-215ENST00000548863 PRIMA1Q86XR5 153 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 C7orf31Q8N865 590 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 GPR150Q8NGU9 434 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
CNOT2-215ENST00000548863 TOR3AQ9H497 397 aa6.63□□□□□ -1.35
CNOT2-215ENST00000548863 TNPO3Q9Y5L0 923 aaKnown RBP6.63□□□□□ -1.35
CNOT2-215ENST00000548863 GRID2IPA4D2P6 1211 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 OPA1O60313 960 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 GAAP10253 952 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 PLEKHG4Q58EX7 1191 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 CREB3L3Q68CJ9 461 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 IQSEC1Q6DN90 963 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 UNC5BQ8IZJ1 945 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 UIMC1Q96RL1 719 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 NCDNQ9UBB6 729 aa6.62□□□□□ -1.35
CNOT2-215ENST00000548863 B3GALT2O43825 422 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 STC2O76061 302 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 SLC9A1P19634 815 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 FLT3P36888 993 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 UNQ6494/PRO21346Q6UXR6 183 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 UBE2R2Q712K3 238 aaPredicted RBP6.61□□□□□ -1.35
CNOT2-215ENST00000548863 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 SORCS3Q9UPU3 1222 aa6.61□□□□□ -1.35
CNOT2-215ENST00000548863 WNT3AP56704 352 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 ZNF460Q14592 562 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 CCDC142Q17RM4 750 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 PIK3R6Q5UE93 754 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 KCNV1Q6PIU1 500 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 CXorf67Q86X51 503 aaPredicted RBP6.6□□□□□ -1.35
CNOT2-215ENST00000548863 GLB1L3Q8NCI6 653 aaPredicted RBP6.6□□□□□ -1.35
CNOT2-215ENST00000548863 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 NOL10Q9BSC4 688 aaKnown RBP6.6□□□□□ -1.35
CNOT2-215ENST00000548863 MYL10Q9BUA6 226 aa6.6□□□□□ -1.35
CNOT2-215ENST00000548863 GYPEP15421 78 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 ZFP36P26651 326 aaKnown RBP6.59□□□□□ -1.35
CNOT2-215ENST00000548863 LRRC32Q14392 662 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 DOK3Q7L591 496 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 FAM83AQ86UY5 434 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 KIF18BQ86Y91 864 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 SLC46A2Q9BY10 475 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 KCNH6Q9H252 994 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 POFUT1Q9H488 388 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 ING3Q9NXR8 418 aa6.59□□□□□ -1.35
CNOT2-215ENST00000548863 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
CNOT2-215ENST00000548863 AHRRA9YTQ3 701 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 RFPL3O75679 317 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 ALDH1A2O94788 518 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 NUDT3O95989 172 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 LAG3P18627 525 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 HK1P19367 917 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 HNRNPA0Q13151 305 aaKnown RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 MRPL49Q13405 166 aaKnown RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 VPS72Q15906 364 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms