RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 POLGP54098 1239 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 TMEM184AQ6ZMB5 413 aa19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 CATSPER4Q7RTX7 472 aa19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 SLFN12Q8IYM2 578 aa19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 FAM105AQ9NUU6 356 aa19.46■□□□□ 0.71
CHMP1A-205ENST00000548650 TRIOO75962 3097 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 LOC730098B7Z3J9 87 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 JAK2O60674 1132 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 BCAR1P56945 870 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 CYP4A11Q02928 519 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 KRT17Q04695 432 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 ST3GAL1Q11201 340 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 CBX2Q14781 532 aaPredicted RBP19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 EMC2Q15006 297 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 PRPF31Q8WWY3 499 aaKnown RBP19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 PSPC1Q8WXF1 523 aaKnown RBP19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 TMEM143Q96AN5 459 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 DYDC2Q96IM9 177 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 MINDY3Q9H8M7 445 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 BRMS1Q9HCU9 246 aa19.45■□□□□ 0.7
CHMP1A-205ENST00000548650 WNT7AO00755 349 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 ZNF623O75123 536 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 ZC3H11AO75152 810 aaKnown RBP eCLIP19.44■□□□□ 0.72e-6■■■■■ 37.4
CHMP1A-205ENST00000548650 SRGAP2BP0DMP2 458 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 SKIP12755 728 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 CTTNQ14247 550 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 SMC1AQ14683 1233 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 LONRF3Q496Y0 759 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 ANKRD54Q6NXT1 300 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 LLGL2Q6P1M3 1020 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 SYCE2Q6PIF2 218 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 GLB1LQ6UWU2 654 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 TMC7Q7Z402 723 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 EXOC8Q8IYI6 725 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 PHF7Q9BWX1 381 aaPredicted RBP19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 ZSWIM4Q9H7M6 989 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 TBC1D13Q9NVG8 400 aa19.44■□□□□ 0.7
CHMP1A-205ENST00000548650 C2orf71A6NGG8 1288 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 NT5C1B-RDH14C9J2C7 533 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 ZBTB39O15060 712 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 GAS2O43903 313 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 MARCH6O60337 910 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 B4GALT3O60512 393 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 TECP42680 631 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 ALDH7A1P49419 539 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 LAMTOR4Q0VGL1 99 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 NOMO2Q5JPE7 1267 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 ERICH6BQ5W0A0 696 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 BCL7CQ8WUZ0 217 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 TMEM169Q96HH4 297 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 S1PR5Q9H228 398 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 XPNPEP1Q9NQW7 623 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 INPP5FQ9Y2H2 1132 aa19.43■□□□□ 0.7
CHMP1A-205ENST00000548650 DENND4AQ7Z401 1863 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 BTBD18B2RXH4 712 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 OFD1O75665 1012 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 SRGAP2CP0DJJ0 459 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 FOSBP53539 338 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 XKR9Q5GH70 373 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 UBXN11Q5T124 520 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 SRGAP1Q7Z6B7 1085 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 FERMT3Q86UX7 667 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 DIS3L2Q8IYB7 885 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 MRPL43Q8N983 215 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 TCP11Q8WWU5 503 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 ZBP1Q9H171 429 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 NRDE2Q9H7Z3 1164 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 PCDHB2Q9Y5E7 798 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 HCFC2Q9Y5Z7 792 aa19.42■□□□□ 0.7
CHMP1A-205ENST00000548650 SLITRK3O94933 977 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 LYPLA2O95372 231 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 BAG4O95429 457 aaKnown RBP19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 HOXA11P31270 313 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 NEK4P51957 841 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 CALCRLQ16602 461 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 AGMOQ6ZNB7 445 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 HFE2Q6ZVN8 426 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 OTUD6AQ7L8S5 288 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 RNF149Q8NC42 400 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 MTRQ99707 1265 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 HSD17B14Q9BPX1 270 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 EIF2AK1Q9BQI3 630 aaKnown RBP19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 DNAJB4Q9UDY4 337 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 KMT2EQ8IZD2 1858 aa19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 TDRD15B5MCY1 1934 aaKnown RBP19.41■□□□□ 0.7
CHMP1A-205ENST00000548650 PIEZO1Q92508 2521 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 CARNS1A5YM72 827 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 NEMFO60524 1076 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 CLASP2O75122 1294 aaKnown RBP19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 SLC11A1P49279 550 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 MRPL10Q7Z7H8 261 aaKnown RBP19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 TPH2Q8IWU9 490 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 EDAQ92838 391 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 CASP10Q92851 521 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 PGBD4Q96DM1 585 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 IGSF21Q96ID5 467 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 RPGRIP1Q96KN7 1286 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 APOL5Q9BWW9 433 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms