RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 DARSP14868 501 aaKnown RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 ZSCAN20P17040 1043 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 IBSPP21815 317 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 CDC25AP30304 524 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 PBX2P40425 430 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 PHKA2P46019 1235 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 RABGGTBP53611 331 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 FAM102BQ5T8I3 360 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.66□□□□□ -0.86
SP1-203ENST00000548560 MAEAQ7L5Y9 396 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 RNF149Q8NC42 400 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 PRPF31Q8WWY3 499 aaKnown RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 YME1L1Q96TA2 773 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 FDXACB1Q9BRP7 624 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 POLR3FQ9H1D9 316 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 BHMT2Q9H2M3 363 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 ADAMTS10Q9H324 1103 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 SLC28A3Q9HAS3 691 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 XPNPEP1Q9NQW7 623 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 C1orf112Q9NSG2 853 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 COL4A4P53420 1690 aaPredicted RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 VCANP13611 3396 aa9.66□□□□□ -0.86
SP1-203ENST00000548560 SPTBN5Q9NRC6 3674 aaKnown RBP9.66□□□□□ -0.86
SP1-203ENST00000548560 TDRD15B5MCY1 1934 aaKnown RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 E9PMD0 336 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 ERLIN2O94905 339 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 YEATS4O95619 227 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 SSBP05455 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
SP1-203ENST00000548560 STAG3L1P0CL83 205 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 NASPP49321 788 aaPredicted RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 PPP2R5AQ15172 486 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 PTPAQ15257 358 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 ECM1Q16610 540 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 HYIQ5T013 277 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 ATL3Q6DD88 541 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 SRGAP1Q7Z6B7 1085 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 KSR1Q8IVT5 923 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 DEFB123Q8N688 67 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 TOP1MTQ969P6 601 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 IFT74Q96LB3 600 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 RAD9AQ99638 391 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 ADAM2Q99965 735 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 MMTAG2Q9BU76 263 aaKnown RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 MTMR10Q9NXD2 777 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 DACT1Q9NYF0 836 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 CFAP45Q9UL16 551 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 INSL6Q9Y581 213 aa9.65□□□□□ -0.86
SP1-203ENST00000548560 SRPRBQ9Y5M8 271 aaKnown RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 MORC2Q9Y6X9 1032 aaPredicted RBP9.65□□□□□ -0.86
SP1-203ENST00000548560 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 LRRIQ4A6NIV6 560 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 INO80B-WBP1J3KQ70 363 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 ENPP3O14638 875 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 SPTLC2O15270 562 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 CA3P07451 260 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 CYP11B2P19099 503 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 FGFR4P22455 802 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 ARL2P36404 184 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 ANP32AP39687 249 aaKnown RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 SARSP49591 514 aaKnown RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 NCBP1Q09161 790 aaKnown RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 GRB10Q13322 594 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 PKP1Q13835 747 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 PCBP1Q15365 356 aaKnown RBP eCLIP9.64□□□□□ -0.87
SP1-203ENST00000548560 TMEM119Q4V9L6 283 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 TWF2Q6IBS0 349 aaKnown RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 SLC24A5Q71RS6 500 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 TMCO2Q7Z6W1 182 aaPredicted RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 NPAS4Q8IUM7 802 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 ZBTB8OSQ8IWT0 167 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 LINC00301Q8NCQ3 95 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 KCNG4Q8TDN1 519 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 ASAP3Q8TDY4 903 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 LINC01599Q8WXQ3 324 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
SP1-203ENST00000548560 DRC1Q96MC2 740 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 FAM161BQ96MY7 647 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 PLIN2Q99541 437 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 TIPINQ9BVW5 301 aa9.64□□□□□ -0.87
SP1-203ENST00000548560 CCSER1Q9C0I3 900 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms