RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZBTB8OSQ8IWT0 167 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 C17orf53Q8N3J3 647 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 BICD1Q96G01 975 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 FAM81BQ96LP2 452 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 C16orf45Q96MC5 204 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 PCYT2Q99447 389 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 LSM14BQ9BX40 385 aaKnown RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 HSPBP1Q9NZL4 362 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 ARHGAP28Q9P2N2 729 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 ADGRG1Q9Y653 693 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 COL1A2P08123 1366 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 PLXNB2O15031 1838 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 SSU72P8A0A1W2PR75 194 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TMEM150BA6NC51 233 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 EIF3CLB5ME19 914 aaKnown RBP14.66□□□□□ -0.06
PTCH1-215ENST00000547672 KIF5CO60282 957 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 SORBS3O60504 671 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 NDUFA10O95299 355 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 ARIH2O95376 493 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TMOD1P28289 359 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 RGS2P41220 211 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TM4SF4P48230 202 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 LIG4P49917 911 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 VAMP7P51809 220 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 ETF1P62495 437 aaKnown RBP14.66□□□□□ -0.06
PTCH1-215ENST00000547672 POU5F1BQ06416 359 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 GOLGA8FQ08AF8 430 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 GOLGA8DPQ0D2H9 430 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TUBB2AQ13885 445 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 HSDL1Q3SXM5 330 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 MORN1Q5T089 497 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 EHBP1Q8NDI1 1231 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 EIF3CQ99613 913 aaKnown RBP14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TUBB2BQ9BVA1 445 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TSGA10Q9BZW7 698 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 DEF6Q9H4E7 631 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 XPNPEP1Q9NQW7 623 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
PTCH1-215ENST00000547672 PLXNA1Q9UIW2 1896 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF236Q9UL36 1845 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF233A6NK53 670 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 RASSF10A6NK89 507 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 TMEM88BA6NKF7 163 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 HNRNPDLO14979 420 aaKnown RBP14.65□□□□□ -0.06
PTCH1-215ENST00000547672 PIGRP01833 764 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 SERPING1P05155 500 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 FMO5P49326 533 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 CASP4P49662 377 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ARHGAP1Q07960 439 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 KCNMA1Q12791 1236 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 PLCB4Q15147 1175 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 DGKDQ16760 1214 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 C10orf76Q5T2E6 689 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 OLFML2BQ68BL8 750 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 SMYD5Q6GMV2 418 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 PDXDC1Q6P996 788 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 C17orf99Q6UX52 265 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ZPBP2Q6X784 338 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 VPS36Q86VN1 386 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 POMGNT1Q8WZA1 660 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 SPAG5Q96R06 1193 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 AIPL1Q9NZN9 384 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 CPA4Q9UI42 421 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ABT1Q9ULW3 272 aaKnown RBP14.65□□□□□ -0.06
PTCH1-215ENST00000547672 Q9Y3F1 56 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
PTCH1-215ENST00000547672 LRRC37A2A6NM11 1700 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 IGKV6-21A0A0C4DH24 114 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 RRN3P2A6NIE6 340 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 LRRIQ4A6NIV6 560 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 KRT86O43790 486 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 ADCY3O60266 1144 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 SNAI1O95863 264 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-215ENST00000547672 PON1P27169 355 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 POLR2FP61218 127 aaKnown RBP14.64□□□□□ -0.07
PTCH1-215ENST00000547672 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 KSR1Q8IVT5 923 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 REXO1L1PQ8IX06 675 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 ZNF710Q8N1W2 664 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 GPD1LQ8N335 351 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 CEP89Q96ST8 783 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 R3HDMLQ9H3Y0 253 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 HAUS4Q9H6D7 363 aa14.64□□□□□ -0.07
PTCH1-215ENST00000547672 NHEJ1Q9H9Q4 299 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-215ENST00000547672 PDGFCQ9NRA1 345 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms