RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 DZANK1Q9NVP4 752 aa25.86■■□□□ 1.73
SMARCD1-204ENST00000547637 M0R2N6 131 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 ZNF623O75123 536 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 GCFC2P16383 781 aaKnown RBP25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 STK3Q13188 491 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 NOMO2Q5JPE7 1267 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 URGCPQ8TCY9 931 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 CEP89Q96ST8 783 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 SH2D3AQ9BRG2 576 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 CYP26B1Q9NR63 512 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 PDRG1Q9NUG6 133 aa25.85■■□□□ 1.73
SMARCD1-204ENST00000547637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 CLASP2O75122 1294 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 STBD1O95210 358 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 P4HBP07237 508 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 ATAT1Q5SQI0 421 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 OTUD6AQ7L8S5 288 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 NEK8Q86SG6 692 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 DDX53Q86TM3 631 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 PPFIBP1Q86W92 1011 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 CEP170P1Q96L14 293 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 FAM193BQ96PV7 902 aaPredicted RBP25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 KANSL3Q9P2N6 904 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 INPP5FQ9Y2H2 1132 aa25.84■■□□□ 1.73
SMARCD1-204ENST00000547637 TMEM150BA6NC51 233 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 PPP2R5CQ13362 524 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 PPP4R3AQ6IN85 833 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 ANO5Q75V66 913 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 SRGAP1Q7Z6B7 1085 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 UBALD2Q8IYN6 164 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 IGSF21Q96ID5 467 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 COL4A3BPQ9Y5P4 624 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 IRAK3Q9Y616 596 aa25.83■■□□□ 1.73
SMARCD1-204ENST00000547637 SPDYE4A6NLX3 237 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 TBX3O15119 743 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 ASAP2O43150 1006 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 GAS2O43903 313 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 BAG4O95429 457 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 CTSAP10619 480 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 SP100P23497 879 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 RFC5P40937 340 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 MTMR3Q13615 1198 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 LONRF3Q496Y0 759 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 PLCD3Q8N3E9 789 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 TCP11Q8WWU5 503 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 PSPC1Q8WXF1 523 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 LPPQ93052 612 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 ZBP1Q9H171 429 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 TBC1D13Q9NVG8 400 aa25.82■■□□□ 1.72
SMARCD1-204ENST00000547637 OFD1O75665 1012 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 GALTP07902 379 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 KSR1Q8IVT5 923 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 LARP6Q9BRS8 491 aaKnown RBP25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 EMILIN2Q9BXX0 1053 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 GBP3Q9H0R5 595 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 NRDE2Q9H7Z3 1164 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 DBR1Q9UK59 544 aaKnown RBP25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 SORCS3Q9UPU3 1222 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 PCDHB2Q9Y5E7 798 aa25.81■■□□□ 1.72
SMARCD1-204ENST00000547637 CCNT1O60563 726 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 ALDH2P05091 517 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 NUBP1P53384 320 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 NCBP1Q09161 790 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 PLA2G4FQ68DD2 849 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 KREMEN2Q8NCW0 462 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 CNNM3Q8NE01 707 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 WASF1Q92558 559 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 ASIC4Q96FT7 647 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 AIFM3Q96NN9 605 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 PHF20Q9BVI0 1012 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 UBN1Q9NPG3 1134 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 AGPAT5Q9NUQ2 364 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 KCNJ14Q9UNX9 436 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 CNTNAP2Q9UHC6 1331 aa25.8■■□□□ 1.72
SMARCD1-204ENST00000547637 EML1O00423 815 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 SLC37A4O43826 429 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 SRGAP2CP0DJJ0 459 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 AVPR2P30518 371 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 EPHA7Q15375 998 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 RARS2Q5T160 578 aaKnown RBP25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 IER5LQ5T953 404 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 CABP7Q86V35 215 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 C4orf19Q8IY42 314 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 SLFN12Q8IYM2 578 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 PRSS33Q8NF86 280 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 POMKQ9H5K3 350 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 RSAD1Q9HA92 442 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 IFT122Q9HBG6 1241 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 KCNMB3Q9NPA1 279 aa25.79■■□□□ 1.72
SMARCD1-204ENST00000547637 ZDBF2Q9HCK1 2354 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 MYO10Q9HD67 2058 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 NPEPPSP55786 919 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 PCBP1Q15365 356 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 NPY5RQ15761 445 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 TDRD5Q8NAT2 981 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 PRPF31Q8WWY3 499 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 DHX33Q9H6R0 707 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 BRMS1Q9HCU9 246 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 USTQ9Y2C2 406 aa25.78■■□□□ 1.72
SMARCD1-204ENST00000547637 SSX2IPQ9Y2D8 614 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms