RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 CDCA2Q69YH5 1023 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 CCDC65Q8IXS2 484 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 VWCEQ96DN2 955 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 GDF15Q99988 308 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 PANK4Q9NVE7 773 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 PADI3Q9ULW8 664 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 FRMD3A2A2Y4 597 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 GTPBP6O43824 516 aaPredicted RBP25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 ACRP10323 421 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 SFPQP23246 707 aaKnown RBP eCLIP25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 NFX1Q12986 1120 aaKnown RBP25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 FAM228AQ86W67 206 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 DBF4BQ8NFT6 615 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 SEPT8Q92599 483 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 MINDY3Q9H8M7 445 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 SEL1LQ9UBV2 794 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 ST3GAL5Q9UNP4 418 aa25.57■■□□□ 1.68
SMARCD1-203ENST00000547247 INO80B-WBP1J3KQ70 363 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 TRAK2O60296 914 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 EFNA5P52803 228 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 APBB2Q92870 758 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 KIFC3Q9BVG8 833 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 HOOK1Q9UJC3 728 aaKnown RBP25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 TET1Q8NFU7 2136 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 ADGRA3Q8IWK6 1321 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 SLC16A4O15374 487 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 MCM4P33991 863 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 HERC4Q5GLZ8 1057 aaPredicted RBP25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 CNKSR3Q6P9H4 555 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 SFR1Q86XK3 245 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 FAM178BQ8IXR5 827 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 ERVK-5Q9HDB9 667 aa25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 COLQQ9Y215 455 aaPredicted RBP25.56■■□□□ 1.68
SMARCD1-203ENST00000547247 PVALEFA0A1B0GWK0 134 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 FGFR4P22455 802 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 EPHB4P54760 987 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 MBTD1Q05BQ5 628 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 POSTNQ15063 836 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 PCBP1Q15365 356 aaKnown RBP eCLIP25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 PSRC1Q6PGN9 363 aaPredicted RBP25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 UNC13DQ70J99 1090 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 C16orf59Q7L2K0 433 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 CATSPER4Q7RTX7 472 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 ARHGAP28Q9P2N2 729 aa25.55■■□□□ 1.68
SMARCD1-203ENST00000547247 H0YCG3 227 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 RBAK-RBAKDNI3L0D1 243 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 PRR29P0C7W0 189 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 NCKAP1LP55160 1127 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 COASYQ13057 564 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 MAPK6Q16659 721 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 ELOA2Q8IYF1 753 aaPredicted RBP25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 SLC17A8Q8NDX2 589 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 PRO3102Q9H379 93 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 OLFML3Q9NRN5 406 aa25.54■■□□□ 1.68
SMARCD1-203ENST00000547247 PHLPP2Q6ZVD8 1323 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 K7ERI5 159 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 ERLIN2O94905 339 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 FGBP02675 491 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 ACTN1P12814 892 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 FAM43BQ6ZT52 329 aaPredicted RBP25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 ZNF365Q70YC5 407 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 TMEM161BQ8NDZ6 487 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 FIZ1Q96SL8 496 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 UBE2OQ9C0C9 1292 aaKnown RBP25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 TMEM134Q9H6X4 195 aa25.53■■□□□ 1.68
SMARCD1-203ENST00000547247 MAPTP10636 758 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 SCP2P22307 547 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 DPYDQ12882 1025 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 IKBKEQ14164 716 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 TMEM240Q5SV17 173 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 HAUS6Q7Z4H7 955 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.52■■□□□ 1.684e-6■■■□□ 18.8
SMARCD1-203ENST00000547247 FTHL17Q9BXU8 183 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 CCDC113Q9H0I3 377 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 FZD8Q9H461 694 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 MRPL44Q9H9J2 332 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 PRMT7Q9NVM4 692 aaPredicted RBP25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 RANBP2P49792 3224 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 DENND3A2RUS2 1198 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 K7ENM7 598 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 BMP8BP34820 402 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 NCBP1Q09161 790 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 PNOCQ13519 176 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 FAM187BQ17R55 369 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 PRIMPOLQ96LW4 560 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 TBC1D7Q9P0N9 293 aa25.52■■□□□ 1.68
SMARCD1-203ENST00000547247 KLRC4O43908 158 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 RPN1P04843 607 aaKnown RBP25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 PRKCBP05771 671 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 NMT1P30419 496 aaKnown RBP25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 ABCD1P33897 745 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 TCTN1Q2MV58 587 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 PPP4R3CPQ6ZMV5 832 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 OTOP2Q7RTS6 562 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 ZNF720Q7Z2F6 126 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 KCNN1Q92952 543 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 CCDC47Q96A33 483 aaKnown RBP25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 ST6GALNAC4Q9H4F1 302 aa25.51■■□□□ 1.67
SMARCD1-203ENST00000547247 ABHD14A-ACY1A0A1B0GW23 586 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 ZSCAN20P17040 1043 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms