RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
COL2A1-209ENST00000546974 SLC39A11Q8N1S5 342 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 TCP11Q8WWU5 503 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 PRPF31Q8WWY3 499 aaKnown RBP16.07■□□□□ 0.16
COL2A1-209ENST00000546974 TMEM143Q96AN5 459 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 TCF25Q9BQ70 676 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 ENTPD7Q9NQZ7 604 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 FAM105AQ9NUU6 356 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 BARX2Q9UMQ3 279 aaPredicted RBP16.07■□□□□ 0.16
COL2A1-209ENST00000546974 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
COL2A1-209ENST00000546974 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 SEC24BO95487 1268 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 PBX3P40426 434 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 ALDH7A1P49419 539 aaKnown RBP16.06■□□□□ 0.16
COL2A1-209ENST00000546974 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 LAMTOR4Q0VGL1 99 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 KCNC3Q14003 757 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 CALCRLQ16602 461 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 TPH2Q8IWU9 490 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 EIF2AK1Q9BQI3 630 aaKnown RBP16.06■□□□□ 0.16
COL2A1-209ENST00000546974 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
COL2A1-209ENST00000546974 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
COL2A1-209ENST00000546974 PRR33A8MZF0 331 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 ZBTB39O15060 712 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 NEMFO60524 1076 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 LYPLA2O95372 231 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 SRGAP2CP0DJJ0 459 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 SRGAP2BP0DMP2 458 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 BCAR1P56945 870 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 EMC2Q15006 297 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 TMC7Q7Z402 723 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 FERMT3Q86UX7 667 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 VN1R2Q8NFZ6 395 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 LPPQ93052 612 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 MTRQ99707 1265 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
COL2A1-209ENST00000546974 HCN4Q9Y3Q4 1203 aa16.05■□□□□ 0.16
COL2A1-209ENST00000546974 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 OFD1O75665 1012 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
COL2A1-209ENST00000546974 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 GLB1LQ6UWU2 654 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 MRPL10Q7Z7H8 261 aaKnown RBP16.04■□□□□ 0.16
COL2A1-209ENST00000546974 TMEM169Q96HH4 297 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 MTMR9Q96QG7 549 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 MINDY3Q9H8M7 445 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-209ENST00000546974 ANKEF1Q9NU02 776 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
COL2A1-209ENST00000546974 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
COL2A1-209ENST00000546974 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 WNT7AO00755 349 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 TXKP42681 527 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 FOSBP53539 338 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 RBM10P98175 930 aaKnown RBP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 POU5F1BQ06416 359 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 LONRF3Q496Y0 759 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 MRPL43Q8N983 215 aaKnown RBP16.03■□□□□ 0.16
COL2A1-209ENST00000546974 RNF149Q8NC42 400 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 SUSD6Q92537 303 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
COL2A1-209ENST00000546974 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 C2orf71A6NGG8 1288 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 DGAT1O75907 488 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 GALTP07902 379 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 XRCC6P12956 609 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 HOXB8P17481 243 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 AXLP30530 894 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 TECP42680 631 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 PTENP60484 403 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 CBX2Q14781 532 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 RNF135Q8IUD6 432 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 URGCPQ8TCY9 931 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-209ENST00000546974 S1PR5Q9H228 398 aa16.02■□□□□ 0.16
COL2A1-209ENST00000546974 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms