RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 ASAP3Q8TDY4 903 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 SNX29Q8TEQ0 813 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 POLR3FQ9H1D9 316 aaPredicted RBP16.41■□□□□ 0.22
CCDC38-205ENST00000546947 CWH43Q9H720 699 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 FAM105AQ9NUU6 356 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 TYW1Q9NV66 732 aaKnown RBP16.41■□□□□ 0.22
CCDC38-205ENST00000546947 PCDHB12Q9Y5F1 795 aa16.41■□□□□ 0.22
CCDC38-205ENST00000546947 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
CCDC38-205ENST00000546947 GRM6O15303 877 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 ZNF623O75123 536 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 ERLIN2O94905 339 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 LAG3P18627 525 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 GLRA2P23416 452 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 IL17AQ16552 155 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 ECM1Q16610 540 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 ARL6IP4Q66PJ3 421 aaKnown RBP16.4■□□□□ 0.22
CCDC38-205ENST00000546947 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 KLHL23Q8NBE8 558 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
CCDC38-205ENST00000546947 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
CCDC38-205ENST00000546947 VPS37CA5D8V6 355 aaPredicted RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 ITGB1P05556 798 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 HOXA11P31270 313 aaPredicted RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 LRRC43Q8N309 656 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 COLGALT1Q8NBJ5 622 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 SPPL3Q8TCT6 385 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 HLA-CQ95604 372 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 SNX21Q969T3 373 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 PGBD4Q96DM1 585 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 ASB2Q96Q27 587 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 DDX19AQ9NUU7 478 aaKnown RBP16.39■□□□□ 0.21
CCDC38-205ENST00000546947 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
CCDC38-205ENST00000546947 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 DLL1O00548 723 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 BMP15O95972 392 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 UBE3AQ05086 875 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 MBTD1Q05BQ5 628 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
CCDC38-205ENST00000546947 LRRC55Q6ZSA7 311 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 MAEAQ7L5Y9 396 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 KCTD17Q8N5Z5 321 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 POF1BQ8WVV4 589 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 BHMT2Q9H2M3 363 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 GPRC5CQ9NQ84 441 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
CCDC38-205ENST00000546947 VCANP13611 3396 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 PP2D1A8MPX8 630 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 TSPAN1O60635 241 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 EYA4O95677 639 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 TCEAL5Q5H9L2 206 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 HYIQ5T013 277 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
CCDC38-205ENST00000546947 NOTUMQ6P988 496 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
CCDC38-205ENST00000546947 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
CCDC38-205ENST00000546947 COL25A1Q9BXS0 654 aaPredicted RBP16.37■□□□□ 0.21
CCDC38-205ENST00000546947 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 HCSTQ9UBK5 93 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 PCDHB2Q9Y5E7 798 aa16.37■□□□□ 0.21
CCDC38-205ENST00000546947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-205ENST00000546947 CARNS1A5YM72 827 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 NCK2O43639 380 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 FGF18O76093 207 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
CCDC38-205ENST00000546947 SYT1P21579 422 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 CDC25AP30304 524 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 PPM1AP35813 382 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 NAMPTP43490 491 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 CAMK1Q14012 370 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 PPP2R5AQ15172 486 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 AMHR2Q16671 573 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 UBXN11Q5T124 520 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 THNSL1Q8IYQ7 743 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 KIFAP3Q92845 792 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 LPPQ93052 612 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 AK8Q96MA6 479 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 ZNF558Q96NG5 402 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 NT5C3AQ9H0P0 336 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 CSRNP2Q9H175 543 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 UBE2ZQ9H832 354 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-205ENST00000546947 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms