RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MGEA5O60502 916 aa16■□□□□ 0.15
DDX54-203ENST00000546869 CSDE1O75534 798 aaKnown RBP16■□□□□ 0.15
DDX54-203ENST00000546869 PLS3P13797 630 aa16■□□□□ 0.15
DDX54-203ENST00000546869 STAT6P42226 847 aa16■□□□□ 0.15
DDX54-203ENST00000546869 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
DDX54-203ENST00000546869 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
DDX54-203ENST00000546869 ZNF131P52739 623 aa16■□□□□ 0.15
DDX54-203ENST00000546869 HTRA4P83105 476 aaPredicted RBP16■□□□□ 0.15
DDX54-203ENST00000546869 MBTD1Q05BQ5 628 aa16■□□□□ 0.15
DDX54-203ENST00000546869 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
DDX54-203ENST00000546869 GIT2Q14161 759 aa16■□□□□ 0.15
DDX54-203ENST00000546869 CATSPER4Q7RTX7 472 aa16■□□□□ 0.15
DDX54-203ENST00000546869 GPBP1Q86WP2 473 aa16■□□□□ 0.15
DDX54-203ENST00000546869 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
DDX54-203ENST00000546869 BSNDQ8WZ55 320 aa16■□□□□ 0.15
DDX54-203ENST00000546869 CHAMP1Q96JM3 812 aa16■□□□□ 0.15
DDX54-203ENST00000546869 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
DDX54-203ENST00000546869 RAD9AQ99638 391 aa16■□□□□ 0.15
DDX54-203ENST00000546869 PBX4Q9BYU1 374 aa16■□□□□ 0.15
DDX54-203ENST00000546869 PANK2Q9BZ23 570 aa16■□□□□ 0.15
DDX54-203ENST00000546869 MAGEF1Q9HAY2 307 aa16■□□□□ 0.15
DDX54-203ENST00000546869 AGPAT5Q9NUQ2 364 aa16■□□□□ 0.15
DDX54-203ENST00000546869 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
DDX54-203ENST00000546869 MSRAQ9UJ68 235 aa16■□□□□ 0.15
DDX54-203ENST00000546869 A0A0U1RQF3 1178 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 STAG3L1P0CL83 205 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
DDX54-203ENST00000546869 NPTX2P47972 431 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 DMP1Q13316 513 aaPredicted RBP15.99■□□□□ 0.15
DDX54-203ENST00000546869 AMHR2Q16671 573 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 NPAS4Q8IUM7 802 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 MYOCDQ8IZQ8 938 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 CCDC51Q96ER9 411 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 TNMDQ9H2S6 317 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 TMEM134Q9H6X4 195 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 PRMT7Q9NVM4 692 aaPredicted RBP15.99■□□□□ 0.15
DDX54-203ENST00000546869 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 KCNH3Q9ULD8 1083 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 INSL6Q9Y581 213 aa15.99■□□□□ 0.15
DDX54-203ENST00000546869 H0YCG3 227 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 INO80B-WBP1J3KQ70 363 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 TSPAN1O60635 241 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 ZNF623O75123 536 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 ERLIN2O94905 339 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 EOMESO95936 686 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 SKIP12755 728 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 FGFR4P22455 802 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 SMTNP53814 917 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 AMPD3Q01432 767 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 CNNM4Q6P4Q7 775 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 PDILTQ8N807 584 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 DEPTORQ8TB45 409 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 RSPH1Q8WYR4 309 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 ZNF689Q96CS4 500 aaPredicted RBP15.98■□□□□ 0.15
DDX54-203ENST00000546869 REEP2Q9BRK0 252 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 POLD4Q9HCU8 107 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 TMEM161AQ9NX61 479 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 ARHGAP28Q9P2N2 729 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 USP25Q9UHP3 1055 aa15.98■□□□□ 0.15
DDX54-203ENST00000546869 A0A1B0GUA9 196 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 MYMKA6NI61 221 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 ACKR2O00590 384 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
DDX54-203ENST00000546869 TLL1O43897 1013 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 DGKIO75912 1065 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 DNAJB2P25686 324 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 ABCD1P33897 745 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 RAB27AP51159 221 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 PEX3P56589 373 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
DDX54-203ENST00000546869 MAPK6Q16659 721 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 SLC17A8Q8NDX2 589 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 SP7Q8TDD2 431 aaPredicted RBP15.97■□□□□ 0.15
DDX54-203ENST00000546869 DDX12PQ92771 950 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 DNAJC19Q96DA6 116 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 RC3H2Q9HBD1 1191 aaKnown RBP15.97■□□□□ 0.15
DDX54-203ENST00000546869 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 PIN4Q9Y237 131 aaKnown RBP15.97■□□□□ 0.15
DDX54-203ENST00000546869 PCDHB7Q9Y5E2 793 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 MICAL3Q7RTP6 2002 aa15.97■□□□□ 0.15
DDX54-203ENST00000546869 NPHP3-ACAD11A0A0J9YXS1 232 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 FRMD3A2A2Y4 597 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 CCDC169A6NNP5 214 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 SFI1A8K8P3 1242 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 K7ERI5 159 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 KRT18P05783 430 aaKnown RBP15.96■□□□□ 0.15
DDX54-203ENST00000546869 MAPTP10636 758 aaKnown RBP15.96■□□□□ 0.15
DDX54-203ENST00000546869 NCKAP1LP55160 1127 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 RAD51AP2Q09MP3 1159 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 CSPP1Q1MSJ5 1256 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 MRPL10Q7Z7H8 261 aaKnown RBP15.96■□□□□ 0.15
DDX54-203ENST00000546869 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
DDX54-203ENST00000546869 ECHDC2Q86YB7 292 aa15.96■□□□□ 0.15
DDX54-203ENST00000546869 CNNM3Q8NE01 707 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms