RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PHLDB3Q6NSJ2 640 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 MIS18BP1Q6P0N0 1132 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 NIPA1Q7RTP0 329 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 TAS1R3Q7RTX0 852 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
CCDC38-202ENST00000546386 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 ZIC5Q96T25 663 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 RHOXF2Q9BQY4 288 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 NUP58Q9BVL2 599 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 RNPEPQ9H4A4 650 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
CCDC38-202ENST00000546386 PPP1R37O75864 691 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 FDX1P10109 184 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 ABCB4P21439 1286 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 FMO5P49326 533 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 EMC2Q15006 297 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 LLGL1Q15334 1064 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 FRMD5Q7Z6J6 570 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 ARHGEF19Q8IW93 802 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 DHX38Q92620 1227 aaKnown RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 GANQ9H2C0 597 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 UBE2TQ9NPD8 197 aaPredicted RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 MYH9P35579 1960 aaKnown RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 CXCL11O14625 94 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 FTCDO95954 541 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 MAGEA1P43355 309 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 CLCN3P51790 818 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 HUNKP57058 714 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 BFSP1Q12934 665 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 GBA2Q9HCG7 927 aaPredicted RBP13.04□□□□□ -0.32
CCDC38-202ENST00000546386 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
CCDC38-202ENST00000546386 LCTP09848 1927 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 OSBPP22059 807 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 CYLC1P35663 651 aaPredicted RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 LDLRAD1Q5T700 205 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 GLYCTKQ8IVS8 523 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 CTAGE9A4FU28 777 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 FOXN3O00409 490 aaPredicted RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SEC31AO94979 1220 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 GNA14O95837 355 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 OATP04181 439 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 KCNJ6P48051 423 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 VAMP7P51809 220 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SMTNP53814 917 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 DPY19L2P1Q6NXN4 242 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 DPP9Q86TI2 863 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 PPM1KQ8N3J5 372 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SEMA4DQ92854 862 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 GDAP1L1Q96MZ0 367 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 CEP72Q9P209 647 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
CCDC38-202ENST00000546386 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
CCDC38-202ENST00000546386 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 CCP110O43303 1012 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 GLRA2P23416 452 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 KLRC1P26715 233 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 NLRP11P59045 1033 aaKnown RBP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 MYL7Q01449 175 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 DRAP1Q14919 205 aaPredicted RBP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 C1orf220Q5T0J3 134 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.32
CCDC38-202ENST00000546386 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 KCND1Q9NSA2 647 aa13.02□□□□□ -0.32
CCDC38-202ENST00000546386 STK24Q9Y6E0 443 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms