RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TRAPPC3O43617 180 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 FTLP02792 175 aaPredicted RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 TRIM59Q8IWR1 403 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 CUEDC2Q9H467 287 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 STK17AQ9UEE5 414 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 IGF2BP3O00425 579 aaKnown RBP eCLIP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 RASGRF2O14827 1237 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 CLDN3O15551 220 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 RHBDL3P58872 404 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 SGSM3Q96HU1 749 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 KLF6Q99612 283 aaPredicted RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 RIC8AQ9NPQ8 531 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 FOXN3O00409 490 aaPredicted RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 IFNB1P01574 187 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 PSMC4P43686 418 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 IFI16Q16666 785 aaKnown RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 ASTE1Q2TB18 679 aaPredicted RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 CBWD6Q4V339 395 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 CBWD3Q5JTY5 395 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 CBWD5Q5RIA9 395 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 C15orf52Q6ZUT6 534 aaKnown RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 FAM228AQ86W67 206 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
HOXC11-202ENST00000546378 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
HOXC11-202ENST00000546378 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 GOLGA8RI6L899 631 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 LAD1O00515 517 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 KNOP1Q1ED39 458 aaKnown RBP15.8■□□□□ 0.12
HOXC11-202ENST00000546378 CDC42EP5Q6NZY7 148 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
HOXC11-202ENST00000546378 IRF2BP2Q7Z5L9 587 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 VSIG1Q86XK7 387 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 ZCWPW1Q9H0M4 648 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 ECT2Q9H8V3 914 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 SH3GLB2Q9NR46 395 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 AGAP1Q9UPQ3 857 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.8■□□□□ 0.12
HOXC11-202ENST00000546378 TCP10L2B9ZVM9 353 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 M0R2N6 131 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 CALCOCO2Q13137 446 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 CPXCR1Q8N123 301 aa15.8■□□□□ 0.12
HOXC11-202ENST00000546378 RSRC1Q96IZ7 334 aaKnown RBP15.8■□□□□ 0.12
HOXC11-202ENST00000546378 GJB6O95452 261 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 STX2P32856 288 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 HSPA9P38646 679 aaKnown RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 PPP4CP60510 307 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 DLG4P78352 724 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 GLE1Q53GS7 698 aaKnown RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 MTMR9Q96QG7 549 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 KIFC3Q9BVG8 833 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 C12orf65Q9H3J6 166 aaKnown RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 TCEAL9Q9UHQ7 104 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 CHD4Q14839 1912 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 ANP32DO95626 131 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 PRPHP41219 470 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 SMTNP53814 917 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 TMED2Q15363 201 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 FAM178BQ8IXR5 827 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 LNX1Q8TBB1 728 aaPredicted RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 SAAL1Q96ER3 474 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 TRIM7Q9C029 511 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 FSBPO95073 299 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 MYL1P05976 194 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 ECHS1P30084 290 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 RPL21P46778 160 aaKnown RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 SEPT2Q15019 361 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 GNPTABQ3T906 1256 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 HS2ST1Q7LGA3 356 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 LMBR1Q8WVP7 490 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 ARHGEF2Q92974 986 aaKnown RBP15.79■□□□□ 0.12
HOXC11-202ENST00000546378 PI4K2AQ9BTU6 479 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 MTMR4Q9NYA4 1195 aa15.79■□□□□ 0.12
HOXC11-202ENST00000546378 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
HOXC11-202ENST00000546378 ADCY8P40145 1251 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 C4orf33Q8N1A6 199 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 AGAP11Q8TF27 550 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 DCTN4Q9UJW0 460 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 LAMB2P55268 1798 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 EML1O00423 815 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 CPP00450 1065 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 ARHGAP4P98171 946 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 RPUSD2Q8IZ73 545 aaKnown RBP15.78■□□□□ 0.12
HOXC11-202ENST00000546378 DHX38Q92620 1227 aaKnown RBP15.78■□□□□ 0.12
HOXC11-202ENST00000546378 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 FRMD4BQ9Y2L6 1034 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 PCDHGC5Q9Y5F6 944 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 CCT8L1PA6NM43 557 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 PI4K2BG5E9Z4 385 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms