RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 AHI1Q8N157 1196 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 HIST1H2AHQ96KK5 128 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 UIMC1Q96RL1 719 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 HIST1H2AJQ99878 128 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 OSBPL6Q9BZF3 934 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 ZNF703Q9H7S9 590 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-224ENST00000545688 SPTLC3Q9NUV7 552 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 SCNN1BP51168 640 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 TUBA3CQ13748 450 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
SNHG1-224ENST00000545688 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 FKBP15Q5T1M5 1219 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 KIAA0907Q7Z7F0 614 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-224ENST00000545688 PIK3C3Q8NEB9 887 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 USP36Q9P275 1121 aaKnown RBP6.85□□□□□ -1.31
SNHG1-224ENST00000545688 PCDHB6Q9Y5E3 794 aa6.85□□□□□ -1.31
SNHG1-224ENST00000545688 FSBPO95073 299 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 GAAP10253 952 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 LSSP48449 732 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 IL2P60568 153 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 FHL2Q14192 279 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 GPR158Q5T848 1215 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 FNDC7Q5VTL7 733 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 CMTM4Q8IZR5 234 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 PPP1R14CQ8TAE6 165 aa6.84□□□□□ -1.31
SNHG1-224ENST00000545688 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.84□□□□□ -1.31
SNHG1-224ENST00000545688 ST20-MTHFSA0A0A6YYL1 179 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 GSG1L2A8MUP6 293 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 MTSS1O43312 755 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 STC2O76061 302 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 PFKMP08237 780 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 MCM7P33993 719 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 PHC1P78364 1004 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 OCRLQ01968 901 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 CD69Q07108 199 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 CNGB1Q14028 1251 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-224ENST00000545688 ELOA2Q8IYF1 753 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-224ENST00000545688 CDYL2Q8N8U2 506 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 ZNF610Q8N9Z0 462 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 ARL8AQ96BM9 186 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 PARPBPQ9NWS1 579 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 ING3Q9NXR8 418 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 USP18Q9UMW8 372 aa6.83□□□□□ -1.32
SNHG1-224ENST00000545688 FKBP9O95302 570 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 LSP1P33241 339 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 MAN2A2P49641 1150 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 RABGGTBP53611 331 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 NPEPPSP55786 919 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 SPIDRQ14159 915 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 TERF2Q15554 542 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 MFSD5Q6N075 450 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 GSPT2Q8IYD1 628 aaKnown RBP6.82□□□□□ -1.32
SNHG1-224ENST00000545688 UNC5BQ8IZJ1 945 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 MB21D1Q8N884 522 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 ZNF512Q96ME7 567 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-224ENST00000545688 FDXACB1Q9BRP7 624 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-224ENST00000545688 GPR87Q9BY21 358 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 MMRN2Q9H8L6 949 aa6.82□□□□□ -1.32
SNHG1-224ENST00000545688 A0A087X0B3 334 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 PRSS38A1L453 326 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 KLRG2A4D1S0 409 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-224ENST00000545688 ENPP3O14638 875 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 SUV39H1O43463 412 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 ALDH1A2O94788 518 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 C1QL3Q5VWW1 255 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 CXorf67Q86X51 503 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-224ENST00000545688 ZNF483Q8TF39 744 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-224ENST00000545688 LEO1Q8WVC0 666 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-224ENST00000545688 TRIM8Q9BZR9 551 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 EMC7Q9NPA0 242 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 PPP2R3BQ9Y5P8 575 aa6.81□□□□□ -1.32
SNHG1-224ENST00000545688 SEC24DO94855 1032 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-224ENST00000545688 LY86O95711 162 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 SLC25A3Q00325 362 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 TOB2Q14106 344 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-224ENST00000545688 FAM214AQ32MH5 1076 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 C11orf74Q86VG3 221 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 MDGA1Q8NFP4 955 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 ATXN2LQ8WWM7 1075 aaKnown RBP6.8□□□□□ -1.32
SNHG1-224ENST00000545688 NEU4Q8WWR8 484 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-224ENST00000545688 GAB3Q8WWW8 586 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 PGBD4Q96DM1 585 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 SLC2A4RGQ9NR83 387 aa6.8□□□□□ -1.32
SNHG1-224ENST00000545688 REXO2Q9Y3B8 237 aaKnown RBP6.8□□□□□ -1.32
SNHG1-224ENST00000545688 XDHP47989 1333 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 PDE8AO60658 829 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 MFAP3LO75121 409 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 MYCLP1P12525 358 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-224ENST00000545688 MANFP55145 182 aaKnown RBP6.79□□□□□ -1.32
SNHG1-224ENST00000545688 DDB1Q16531 1140 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 BROXQ5VW32 411 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 ZNF662Q6ZS27 426 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 SLC5A5Q92911 643 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 MNTQ99583 582 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 ANO3Q9BYT9 981 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms