RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 HLA-DOAP06340 250 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 WEE2P0C1S8 567 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 MAGEA9P43362 315 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 GSTO1P78417 241 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 UBE3AQ05086 875 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 SEPT2Q15019 361 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 ATAT1Q5SQI0 421 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 DCLRE1AQ6PJP8 1040 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 KIAA1211Q6ZU35 1233 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 OTOP3Q7RTS5 596 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 SLC44A3Q8N4M1 653 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 ANKRD44Q8N8A2 993 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 CASP10Q92851 521 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 PMEPA1Q969W9 287 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 TEX13BQ9BXU2 312 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 FBXO28Q9NVF7 368 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 DDX19BQ9UMR2 479 aa7.96□□□□□ -1.14
LDHA-223ENST00000545215 MRPL42Q9Y6G3 142 aaKnown RBP7.96□□□□□ -1.14
LDHA-223ENST00000545215 FLT1P17948 1338 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 FSCN2O14926 492 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 GNAI3P08754 354 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 HMGB1P09429 215 aaKnown RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 TDGF1P13385 188 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 ERVFC1P60507 584 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 SIM2Q14190 667 aaPredicted RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 NONOQ15233 471 aaKnown RBP eCLIP7.95□□□□□ -1.14
LDHA-223ENST00000545215 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 MAPKAPK5Q8IW41 473 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 SPICE1Q8N0Z3 855 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 WNT8BQ93098 351 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 NSUN4Q96CB9 384 aaKnown RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 GPR20Q99678 358 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 OSBPL6Q9BZF3 934 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 BRD7Q9NPI1 651 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 COPRSQ9NQ92 184 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 PPP1R9AQ9ULJ8 1098 aa7.95□□□□□ -1.14
LDHA-223ENST00000545215 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.95□□□□□ -1.14
LDHA-223ENST00000545215 PDS5AQ29RF7 1337 aaKnown RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 KANSL1LA0AUZ9 987 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 RSPH10B2B2RC85 870 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 PYCARD-AS1I3L0S3 204 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 MAFO75444 373 aaPredicted RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 DGKIO75912 1065 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 RSPH10BP0C881 870 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 CES1P23141 567 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 GSTT1P30711 240 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 PHKA1P46020 1223 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 SCAPQ12770 1279 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 MVPQ14764 893 aaKnown RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 KIAA1211LQ6NV74 962 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 ATG9AQ7Z3C6 839 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 FBXO16Q8IX29 292 aaPredicted RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 SHDQ96IW2 340 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 KLHL5Q96PQ7 755 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 DDX23Q9BUQ8 820 aaKnown RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 ZCCHC2Q9C0B9 1178 aaKnown RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 USP44Q9H0E7 712 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 RUBCNLQ9H714 662 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 DYRK1BQ9Y463 629 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 PLXNA4Q9HCM2 1894 aa7.94□□□□□ -1.14
LDHA-223ENST00000545215 FRMPD2Q68DX3 1309 aaPredicted RBP7.94□□□□□ -1.14
LDHA-223ENST00000545215 MIA3Q5JRA6 1907 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 A0A1W2PP55 124 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 F5H6K3 240 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 EYA2O00167 538 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 ATP2A1O14983 1001 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 F11P03951 625 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 FGRP09769 529 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 GP1BBP13224 206 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 CSRP1P21291 193 aaKnown RBP7.93□□□□□ -1.14
LDHA-223ENST00000545215 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 PAK2Q13177 524 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 TTC39BQ5VTQ0 682 aaPredicted RBP7.93□□□□□ -1.14
LDHA-223ENST00000545215 ERICH6BQ5W0A0 696 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 EEPD1Q7L9B9 569 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 ITPRIPQ8IWB1 547 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 TMEM57Q8N5G2 664 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 OR6J1Q8NGC5 347 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 RSAD2Q8WXG1 361 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 WDR11Q9BZH6 1224 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 VCPKMTQ9H867 229 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 GPAMQ9HCL2 828 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 VTA1Q9NP79 307 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 GTF2IRD1Q9UHL9 959 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
LDHA-223ENST00000545215 SERPINB13Q9UIV8 391 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 RAXQ9Y2V3 346 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms