RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 LAG3P18627 525 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 EIF4BP23588 611 aaKnown RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 SFNP31947 248 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 JAK3P52333 1124 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 ERVFC1P60507 584 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 KCNC3Q14003 757 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 PTPAQ15257 358 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 LRRC55Q6ZSA7 311 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 RNF135Q8IUD6 432 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 THNSL1Q8IYQ7 743 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 PCDHA12Q9UN75 941 aa13.92□□□□□ -0.18
ACTN1-206ENST00000544964 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-206ENST00000544964 KMT2EQ8IZD2 1858 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 EML1O00423 815 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 PER2O15055 1255 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 DARSP14868 501 aaKnown RBP13.91□□□□□ -0.18
ACTN1-206ENST00000544964 PBX3P40426 434 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 TECP42680 631 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 SPIRE1Q08AE8 756 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 IL17AQ16552 155 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 DUSP6Q16828 381 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 HFE2Q6ZVN8 426 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 MIER3Q7Z3K6 550 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 ZNF598Q86UK7 904 aaKnown RBP13.91□□□□□ -0.18
ACTN1-206ENST00000544964 ECHDC2Q86YB7 292 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 TLE6Q9H808 572 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
ACTN1-206ENST00000544964 POTEMA6NI47 508 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 LAD1O00515 517 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
ACTN1-206ENST00000544964 FGFR4P22455 802 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 TMOD1P28289 359 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-206ENST00000544964 PRPHP41219 470 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-206ENST00000544964 PLCB3Q01970 1234 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 PPP2R5CQ13362 524 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-206ENST00000544964 STK38Q15208 465 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 SUSD6Q92537 303 aa13.9□□□□□ -0.18
ACTN1-206ENST00000544964 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-206ENST00000544964 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 A0A0U1RQF3 1178 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 VWA3AA6NCI4 1184 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 HOXA2O43364 376 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 BMP15O95972 392 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 GRIN1Q05586 938 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 MICAL1Q8TDZ2 1067 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 MRPS27Q92552 414 aaKnown RBP13.89□□□□□ -0.19
ACTN1-206ENST00000544964 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-206ENST00000544964 SH2D3AQ9BRG2 576 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 NIFKQ9BYG3 293 aaKnown RBP13.89□□□□□ -0.19
ACTN1-206ENST00000544964 NRBP2Q9NSY0 501 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
ACTN1-206ENST00000544964 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
ACTN1-206ENST00000544964 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-206ENST00000544964 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■□ 21.1
ACTN1-206ENST00000544964 EPHA7Q15375 998 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 ARL6IP4Q66PJ3 421 aaKnown RBP13.88□□□□□ -0.19
ACTN1-206ENST00000544964 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
ACTN1-206ENST00000544964 TMEM184AQ6ZMB5 413 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 DYDC2Q96IM9 177 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 TCF25Q9BQ70 676 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 FBXO2Q9UK22 296 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-206ENST00000544964 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
ACTN1-206ENST00000544964 DENND4AQ7Z401 1863 aa13.87□□□□□ -0.19
ACTN1-206ENST00000544964 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
ACTN1-206ENST00000544964 SPTLC2O15270 562 aa13.87□□□□□ -0.19
ACTN1-206ENST00000544964 YEATS4O95619 227 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms