RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CCDC105Q8IYK2 499 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 TMEM87AQ8NBN3 555 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 PPTC7Q8NI37 304 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 CYP2W1Q8TAV3 490 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 WHAMMQ8TF30 809 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 COPS5Q92905 334 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 TNFRSF25Q93038 417 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 CRELD1Q96HD1 420 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 DNAJC2Q99543 621 aaKnown RBP4.79□□□□□ -1.64
SNHG1-220ENST00000544550 MDFIQ99750 246 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 RANBP17Q9H2T7 1088 aaKnown RBP4.79□□□□□ -1.64
SNHG1-220ENST00000544550 TLE6Q9H808 572 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 RC3H2Q9HBD1 1191 aaKnown RBP4.79□□□□□ -1.64
SNHG1-220ENST00000544550 DNAJB12Q9NXW2 375 aaKnown RBP4.79□□□□□ -1.64
SNHG1-220ENST00000544550 FAM8A1Q9UBU6 413 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 KLF15Q9UIH9 416 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 ZNFX1Q9P2E3 1918 aaKnown RBP4.79□□□□□ -1.64
SNHG1-220ENST00000544550 TRANK1O15050 2925 aa4.79□□□□□ -1.64
SNHG1-220ENST00000544550 PLIN4Q96Q06 1357 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 C17orf102A2RUQ5 167 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 MINDY4BA8MYZ0 360 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 PRR5-ARHGAP8B1AHC4 643 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 NFIBO00712 420 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 PPFIA4O75335 1185 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ARIH2O95376 493 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ACPPP15309 386 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 MCCP23508 829 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 MAP2K3P46734 347 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 PCBP4P57723 403 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 RPS6P62753 249 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ARHGAP8P85298 464 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SRSF11Q05519 484 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ITIH3Q06033 890 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ARHGAP1Q07960 439 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SLFN5Q08AF3 891 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 DMWDQ09019 674 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CAMK1Q14012 370 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 PCSK7Q16549 785 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CES5AQ6NT32 575 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CCDC62Q6P9F0 684 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SLC30A10Q6XR72 485 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 TMEM184AQ6ZMB5 413 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CHST3Q7LGC8 479 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ADGRD2Q7Z7M1 963 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 RBM23Q86U06 439 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CMTR2Q8IYT2 770 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 DTWD2Q8NBA8 298 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 FLCNQ8NFG4 579 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 NEDD1Q8NHV4 660 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SPPL3Q8TCT6 385 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ATP8B4Q8TF62 1192 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 POF1BQ8WVV4 589 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ATP6V0A1Q93050 837 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SECISBP2LQ93073 1101 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 WNT8BQ93098 351 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ZNF689Q96CS4 500 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 CHAMP1Q96JM3 812 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 NSUN5Q96P11 429 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 TCF12Q99081 682 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 OSMRQ99650 979 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 ZKSCAN3Q9BRR0 538 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 METTL5Q9NRN9 209 aaKnown RBP4.78□□□□□ -1.64
SNHG1-220ENST00000544550 DZANK1Q9NVP4 752 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 SCN5AQ14524 2016 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 TECTAO75443 2155 aa4.78□□□□□ -1.64
SNHG1-220ENST00000544550 WDFY4Q6ZS81 3184 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 SCN10AQ9Y5Y9 1956 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ADARB2-AS1A8MUL3 147 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 J3QW42 95 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 BCAR3O75815 825 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 DGKIO75912 1065 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ITGB1P05556 798 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ADRB1P08588 477 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 IFIT2P09913 472 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 USP17L7P0C7H9 530 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ZNF286BP0CG31 522 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 STAG3L1P0CL83 205 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 GNAT2P19087 354 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 TECP42680 631 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 RARSP54136 660 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ZNF200P98182 395 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 LMNB2Q03252 620 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 STXBP2Q15833 593 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 DUSP6Q16828 381 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 LY6KQ17RY6 165 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 CCDC96Q2M329 555 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 RNFT1Q5M7Z0 435 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 CWF19L1Q69YN2 538 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ANKRD54Q6NXT1 300 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 KCNV1Q6PIU1 500 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 RUFY4Q6ZNE9 571 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 FAM43BQ6ZT52 329 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 KCTD1Q719H9 257 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 CCNJLQ8IV13 435 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 ZDHHC14Q8IZN3 488 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms