RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	LY86	O95711	162 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	GAA	P10253	952 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	OSM	P13725	252 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	MTHFD2	P13995	350 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	MTNR1B	P49286	362 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	RAC3	P60763	192 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	CCT2	P78371	535 aa	Known RBP	7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	MUM1	Q2TAK8	710 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	FBLN7	Q53RD9	439 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	LCE3B	Q5TA77	95 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	PGM2L1	Q6PCE3	622 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	AMOTL1	Q8IY63	956 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	ANKRD13A	Q8IZ07	590 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	UNC5B	Q8IZJ1	945 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	PLA2G15	Q8NCC3	412 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	GCDH	Q92947	438 aa	Predicted RBP	7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	NEIL1	Q96FI4	390 aa	Predicted RBP	7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	PTPN18	Q99952	460 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	JADE2	Q9NQC1	790 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	ZNF536	O15090	1300 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	TNKS	O95271	1327 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	SHTN1	A0MZ66	631 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	DAPK3	O43293	454 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	PLAT	P00750	562 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	CFB	P00751	764 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	ATP2C1	P98194	919 aa	Predicted RBP	7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	TCIRG1	Q13488	830 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	ACAP1	Q15027	740 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	CLUL1	Q15846	466 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	FAXDC2	Q96IV6	333 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	C20orf173	Q96LM9	149 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	LRRC37B	Q96QE4	947 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	UIMC1	Q96RL1	719 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	LMF1	Q96S06	567 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	DPYSL5	Q9BPU6	564 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	SEC61A2	Q9H9S3	476 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	IFT122	Q9HBG6	1241 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	MKS1	Q9NXB0	559 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	PPP4R1L	Q9P1A2	415 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	PUF60	Q9UHX1	559 aa	Known RBP	7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	OAZ3	Q9UMX2	235 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506	GPR45	Q9Y5Y3	372 aa		7.1	□□□□□ -1.27
LEMD3-205	ENST00000544506		A0A1W2PR48	441 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	TMEM127	O75204	238 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	RBP3	P10745	1247 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	BPIFB4	P59827	614 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	PTPN21	Q16825	1174 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	SLFN13	Q68D06	897 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	SLC6A15	Q9H2J7	730 aa		7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	C14orf93	Q9H972	538 aa	Known RBP	7.09	□□□□□ -1.27
LEMD3-205	ENST00000544506	TOX4	O94842	621 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	AGXT	P21549	392 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	ADCY7	P51828	1080 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	ADAM8	P78325	824 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	NFIX	Q14938	502 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	ANKRD53	Q8N9V6	530 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	ACE2	Q9BYF1	805 aa	Predicted RBP	7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	C12orf65	Q9H3J6	166 aa	Known RBP	7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	RAPGEFL1	Q9UHV5	662 aa		7.08	□□□□□ -1.28
LEMD3-205	ENST00000544506	SLC26A4	O43511	780 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA12	O60330	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	CDC14B	O60729	498 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	CR2	P20023	1033 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	KIR2DL3	P43628	341 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	SLC5A3	P53794	718 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	ADRM1	Q16186	407 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	MBNL2	Q5VZF2	373 aa	Known RBP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	MSL3	Q8N5Y2	521 aa	Known RBP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	GLB1L3	Q8NCI6	653 aa	Predicted RBP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	RPL10L	Q96L21	214 aa	Known RBP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	GNRHR2	Q96P88	292 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	SLC2A13	Q96QE2	648 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	CEP89	Q96ST8	783 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	ING3	Q9NXR8	418 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	SPEF1	Q9Y4P9	236 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA8	Q9Y5G5	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA7	Q9Y5G6	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA6	Q9Y5G7	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA3	Q9Y5H0	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	PCDHGA2	Q9Y5H1	932 aa		7.07	□□□□□ -1.28
LEMD3-205	ENST00000544506	NPEPPSL1	A6NEC2	478 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	XPOT	O43592	962 aa	Known RBP	7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	ALDH1A2	O94788	518 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	LTA4H	P09960	611 aa	Known RBP	7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	VSIG10L2	P0DP72	767 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	NEK2	P51955	445 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	KRT85	P78386	507 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	MEF2A	Q02078	507 aa	Predicted RBP	7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	ACAP2	Q15057	778 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	ANO4	Q32M45	955 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	PLEKHG6	Q3KR16	790 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	GAGE13	Q4V321	117 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	KRT40	Q6A162	431 aa		7.06	□□□□□ -1.28
LEMD3-205	ENST00000544506	TAS1R1	Q7RTX1	841 aa		7.06	□□□□□ -1.28

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