RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CATSPER4Q7RTX7 472 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 BLIDQ8IZY5 108 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 ETNPPLQ8TBG4 499 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 AUTS2Q8WXX7 1259 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 JPH2Q9BR39 696 aaPredicted RBP25.39■■□□□ 1.66
CDKN3-207ENST00000543789 M0R2N6 131 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 OFD1O75665 1012 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 RAB27AP51159 221 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 PSMC5P62195 406 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 RNASELQ05823 741 aaKnown RBP25.38■■□□□ 1.65
CDKN3-207ENST00000543789 MOXD1Q6UVY6 613 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 KSR1Q8IVT5 923 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 ATOH1Q92858 354 aaPredicted RBP25.38■■□□□ 1.65
CDKN3-207ENST00000543789 NLRP4Q96MN2 994 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 MBOAT7Q96N66 472 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 INPP5FQ9Y2H2 1132 aa25.38■■□□□ 1.65
CDKN3-207ENST00000543789 CPLX1O14810 134 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 ST18O60284 1047 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 REC8O95072 547 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 DEXIO95424 95 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 BRD1O95696 1058 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 EPCAMP16422 314 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 GALNT17Q6IS24 598 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 ANO5Q75V66 913 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 RUFY3Q7L099 469 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 ZDHHC14Q8IZN3 488 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 PGBD4Q96DM1 585 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 FAM86C1Q9NVL1 165 aa25.37■■□□□ 1.65
CDKN3-207ENST00000543789 DDX25Q9UHL0 483 aaKnown RBP25.37■■□□□ 1.65
CDKN3-207ENST00000543789 DBR1Q9UK59 544 aaKnown RBP25.37■■□□□ 1.65
CDKN3-207ENST00000543789 MEIS3P2A8K0S8 358 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 TOB2Q14106 344 aaPredicted RBP25.36■■□□□ 1.65
CDKN3-207ENST00000543789 KIAA1841Q6NSI8 718 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 KANK3Q6NY19 840 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 PLCD3Q8N3E9 789 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 TDRD5Q8NAT2 981 aaKnown RBP25.36■■□□□ 1.65
CDKN3-207ENST00000543789 DAGLBQ8NCG7 672 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 SLC22A17Q8WUG5 538 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 ZSWIM6Q9HCJ5 1215 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 CYP26B1Q9NR63 512 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 LIMD1Q9UGP4 676 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 PCDHB2Q9Y5E7 798 aa25.36■■□□□ 1.65
CDKN3-207ENST00000543789 NONOQ15233 471 aaKnown RBP eCLIP25.35■■□□□ 1.65
CDKN3-207ENST00000543789 CABP7Q86V35 215 aa25.35■■□□□ 1.65
CDKN3-207ENST00000543789 PPFIBP1Q86W92 1011 aa25.35■■□□□ 1.65
CDKN3-207ENST00000543789 FAM177A1Q8N128 213 aaPredicted RBP25.35■■□□□ 1.65
CDKN3-207ENST00000543789 BCL7CQ8WUZ0 217 aaPredicted RBP25.35■■□□□ 1.65
CDKN3-207ENST00000543789 ZNF274Q96GC6 653 aaPredicted RBP25.35■■□□□ 1.65
CDKN3-207ENST00000543789 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
CDKN3-207ENST00000543789 IFT122Q9HBG6 1241 aa25.35■■□□□ 1.65
CDKN3-207ENST00000543789 USTQ9Y2C2 406 aa25.35■■□□□ 1.65
CDKN3-207ENST00000543789 H0Y858 1186 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 EML1O00423 815 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 ASGR2P07307 311 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 QARSP47897 775 aaKnown RBP25.34■■□□□ 1.65
CDKN3-207ENST00000543789 SLC11A1P49279 550 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 NPY5RQ15761 445 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 PLA2G4FQ68DD2 849 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 EXOC8Q8IYI6 725 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 URGCPQ8TCY9 931 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 DNAJB4Q9UDY4 337 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 STK39Q9UEW8 545 aa25.34■■□□□ 1.65
CDKN3-207ENST00000543789 GALR2O43603 387 aaPredicted RBP25.33■■□□□ 1.65
CDKN3-207ENST00000543789 GFRA3O60609 400 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 DKC1O60832 514 aaKnown RBP eCLIP25.33■■□□□ 1.65
CDKN3-207ENST00000543789 ALDH2P05091 517 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 NPEPPSP55786 919 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 INF2Q27J81 1249 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 CPLX2Q6PUV4 134 aaKnown RBP25.33■■□□□ 1.65
CDKN3-207ENST00000543789 TMC5Q6UXY8 1006 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 AGMOQ6ZNB7 445 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 KRT25Q7Z3Z0 450 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 ZNF280BQ86YH2 543 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 SLC7A3Q8WY07 619 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 SLKQ9H2G2 1235 aaPredicted RBP25.33■■□□□ 1.65
CDKN3-207ENST00000543789 SMOC2Q9H3U7 446 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 AGPAT5Q9NUQ2 364 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 COL4A3BPQ9Y5P4 624 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 CYP46A1Q9Y6A2 500 aa25.33■■□□□ 1.65
CDKN3-207ENST00000543789 SLC37A4O43826 429 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 PPP2R5CQ13362 524 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 PTPN14Q15678 1187 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 LETM2Q2VYF4 491 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 MRPL10Q7Z7H8 261 aaKnown RBP25.32■■□□□ 1.64
CDKN3-207ENST00000543789 CEP170P1Q96L14 293 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 FAM20AQ96MK3 541 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 AIFM3Q96NN9 605 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 LARP6Q9BRS8 491 aaKnown RBP25.32■■□□□ 1.64
CDKN3-207ENST00000543789 VN1R3Q9BXE9 311 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 EMILIN2Q9BXX0 1053 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 KANSL3Q9P2N6 904 aa25.32■■□□□ 1.64
CDKN3-207ENST00000543789 P4HBP07237 508 aaKnown RBP25.31■■□□□ 1.64
CDKN3-207ENST00000543789 SRGAP2CP0DJJ0 459 aa25.31■■□□□ 1.64
CDKN3-207ENST00000543789 SRGAP1Q7Z6B7 1085 aa25.31■■□□□ 1.64
CDKN3-207ENST00000543789 ZNF579Q8NAF0 562 aaKnown RBP25.31■■□□□ 1.64
CDKN3-207ENST00000543789 PRPF31Q8WWY3 499 aaKnown RBP25.31■■□□□ 1.64
CDKN3-207ENST00000543789 KLHL5Q96PQ7 755 aa25.31■■□□□ 1.64
CDKN3-207ENST00000543789 FAM193BQ96PV7 902 aaPredicted RBP25.31■■□□□ 1.64
CDKN3-207ENST00000543789 VAV3Q9UKW4 847 aa25.31■■□□□ 1.64
CDKN3-207ENST00000543789 PPME1Q9Y570 386 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms