RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 XKR9Q5GH70 373 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 TMEM173Q86WV6 379 aaPredicted RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 C4orf19Q8IY42 314 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 SLFN12Q8IYM2 578 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 PRPF31Q8WWY3 499 aaKnown RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 APOL5Q9BWW9 433 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 MRPL9Q9BYD2 267 aaKnown RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 INO80BQ9C086 356 aaPredicted RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 FAM105AQ9NUU6 356 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 PUF60Q9UHX1 559 aaKnown RBP18.21■□□□□ 0.51
SPPL3-207ENST00000543608 HCN4Q9Y3Q4 1203 aa18.21■□□□□ 0.51
SPPL3-207ENST00000543608 PLA2G5P39877 138 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 RFC5P40937 340 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 KRT17Q04695 432 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
SPPL3-207ENST00000543608 TMC7Q7Z402 723 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 RNF135Q8IUD6 432 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 TPH2Q8IWU9 490 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
SPPL3-207ENST00000543608 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
SPPL3-207ENST00000543608 TRAIPQ9BWF2 469 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 ZSWIM4Q9H7M6 989 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 AGPAT5Q9NUQ2 364 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
SPPL3-207ENST00000543608 PRR33A8MZF0 331 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 B4GALT3O60512 393 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 TRIOO75962 3097 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 BAG4O95429 457 aaKnown RBP18.19■□□□□ 0.5
SPPL3-207ENST00000543608 CA8P35219 290 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 TECP42680 631 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 KCNC3Q14003 757 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 CALCRLQ16602 461 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 BCL7CQ8WUZ0 217 aaPredicted RBP18.19■□□□□ 0.5
SPPL3-207ENST00000543608 EIF2AK1Q9BQI3 630 aaKnown RBP18.19■□□□□ 0.5
SPPL3-207ENST00000543608 GBP3Q9H0R5 595 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 NGRNQ9NPE2 291 aaKnown RBP18.19■□□□□ 0.5
SPPL3-207ENST00000543608 XPNPEP1Q9NQW7 623 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 CDH22Q9UJ99 828 aa18.19■□□□□ 0.5
SPPL3-207ENST00000543608 NEMFO60524 1076 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 SLITRK3O94933 977 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 RAB27AP51159 221 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 FERMT3Q86UX7 667 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 RNF149Q8NC42 400 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 AUTS2Q8WXX7 1259 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 FAM122AQ96E09 287 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 MTRQ99707 1265 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 NRDE2Q9H7Z3 1164 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 DNAJB4Q9UDY4 337 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 PCDHB2Q9Y5E7 798 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 MUC6Q6W4X9 2439 aa18.18■□□□□ 0.5
SPPL3-207ENST00000543608 A0A087WWV3 80 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 C2orf71A6NGG8 1288 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 POTEMA6NI47 508 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 OFD1O75665 1012 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 TXKP42681 527 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 ALDH7A1P49419 539 aaKnown RBP18.17■□□□□ 0.5
SPPL3-207ENST00000543608 AFF1P51825 1210 aaKnown RBP18.17■□□□□ 0.5
SPPL3-207ENST00000543608 TRIM29Q14134 588 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
SPPL3-207ENST00000543608 NOMO2Q5JPE7 1267 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 UBXN11Q5T124 520 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 SYCE2Q6PIF2 218 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 SUSD6Q92537 303 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 TMEM169Q96HH4 297 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 TTC12Q9H892 705 aaPredicted RBP18.17■□□□□ 0.5
SPPL3-207ENST00000543608 PCDHA12Q9UN75 941 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 PPME1Q9Y570 386 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 TECTAO75443 2155 aa18.17■□□□□ 0.5
SPPL3-207ENST00000543608 FSD2A1L4K1 749 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 LOC730098B7Z3J9 87 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ZNF623O75123 536 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 SRGAP2BP0DMP2 458 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 SKIP12755 728 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ATP2B1P20020 1258 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 SP100P23497 879 aaPredicted RBP18.16■□□□□ 0.5
SPPL3-207ENST00000543608 HOXA11P31270 313 aaPredicted RBP18.16■□□□□ 0.5
SPPL3-207ENST00000543608 RNASELQ05823 741 aaKnown RBP18.16■□□□□ 0.5
SPPL3-207ENST00000543608 HERC4Q5GLZ8 1057 aaPredicted RBP18.16■□□□□ 0.5
SPPL3-207ENST00000543608 TMEM184AQ6ZMB5 413 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 AGMOQ6ZNB7 445 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 MRPL43Q8N983 215 aaKnown RBP18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ASAP3Q8TDY4 903 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 TCP11Q8WWU5 503 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 HSD17B14Q9BPX1 270 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ZBP1Q9H171 429 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 S1PR5Q9H228 398 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 TMEM60Q9H2L4 133 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 HCFC2Q9Y5Z7 792 aa18.16■□□□□ 0.5
SPPL3-207ENST00000543608 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms