RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
MSH2-206ENST00000543555 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 SYT11Q9BT88 431 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 AS3MTQ9HBK9 375 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 GPRC5CQ9NQ84 441 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 ZNF112Q9UJU3 913 aa15.12■□□□□ 0.01
MSH2-206ENST00000543555 GLTPD2A6NH11 291 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 VAMP7P51809 220 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PHLDB3Q6NSJ2 640 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 GOLPH3Q9H4A6 298 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 EMSYQ7Z589 1322 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 CCDC172P0C7W6 258 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 TNFRSF8P28908 595 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 CCND2P30279 289 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 EPHX2P34913 555 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 NCKAP1LP55160 1127 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PEX3P56589 373 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PLA2G4FQ68DD2 849 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 GLYCTKQ8IVS8 523 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 XXYLT1Q8NBI6 393 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 REPS2Q8NFH8 660 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 HSPBP1Q9NZL4 362 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PARP14Q460N5 1801 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 KCNK3O14649 394 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PTPRAP18433 802 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 SNRPFP62306 86 aaKnown RBP15.11■□□□□ 0.01
MSH2-206ENST00000543555 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
MSH2-206ENST00000543555 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
MSH2-206ENST00000543555 VSIG10LQ86VR7 867 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 WRNIP1Q96S55 665 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 PICK1Q9NRD5 415 aa15.11■□□□□ 0.01
MSH2-206ENST00000543555 SLC16A4O15374 487 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 P4HA2O15460 535 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
MSH2-206ENST00000543555 GALCP54803 685 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 NPEPPSP55786 919 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 PPP3CAQ08209 521 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 ARHGAP44Q17R89 818 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 SLFN11Q7Z7L1 901 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 RDM1Q8NG50 284 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 GPRASP2Q96D09 838 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 PSD3Q9NYI0 1048 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 ERICH4A6NGS2 130 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 MAPK13O15264 365 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 NR3C2P08235 984 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 FAM102BQ5T8I3 360 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 SNRNP48Q6IEG0 339 aaKnown RBP15.1■□□□□ 0.01
MSH2-206ENST00000543555 ZNF746Q6NUN9 644 aaPredicted RBP15.1■□□□□ 0.01
MSH2-206ENST00000543555 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 SLC17A8Q8NDX2 589 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 PBKQ96KB5 322 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 C12orf42Q96LP6 360 aa15.1■□□□□ 0.01
MSH2-206ENST00000543555 MOV10L1Q9BXT6 1211 aaKnown RBP15.1■□□□□ 0.01
MSH2-206ENST00000543555 ADARB2Q9NS39 739 aaKnown RBP15.1■□□□□ 0.01
MSH2-206ENST00000543555 OAZ1P54368 228 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 EPHB4P54760 987 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 CETN1Q12798 172 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 KIF22Q14807 665 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 C1orf220Q5T0J3 134 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 SND1Q7KZF4 910 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH2-206ENST00000543555 SENP7Q9BQF6 1050 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 CEP350Q5VT06 3117 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 PHACTR2O75167 634 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 TMEM253P0C7T8 217 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 HMGCS2P54868 508 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 RNASE9P60153 205 aaKnown RBP15.09■□□□□ 0.01
MSH2-206ENST00000543555 EPC2Q52LR7 807 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 EMBQ6PCB8 327 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 ANO5Q75V66 913 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 TMEM59LQ9UK28 342 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 ZNF214Q9UL59 606 aaPredicted RBP15.09■□□□□ 0.01
MSH2-206ENST00000543555 LRRN2O75325 713 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
MSH2-206ENST00000543555 DSG3P32926 999 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 GCLMP48507 274 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 PEX26Q7Z412 305 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 IFT20Q8IY31 132 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 ZSWIM2Q8NEG5 633 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 PLEKHO2Q8TD55 490 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 KRT12Q99456 494 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 GDF3Q9NR23 364 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 ADAMTS5Q9UNA0 930 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 STXBP5LQ9Y2K9 1186 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 PCDHA10Q9Y5I2 948 aa15.09■□□□□ 0.01
MSH2-206ENST00000543555 NCANO14594 1321 aa15.08■□□□□ 0.01
MSH2-206ENST00000543555 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
MSH2-206ENST00000543555 MAFGO15525 162 aa15.08■□□□□ 0
MSH2-206ENST00000543555 GLI1P08151 1106 aa15.08■□□□□ 0
MSH2-206ENST00000543555 UBE2TQ9NPD8 197 aaPredicted RBP15.08■□□□□ 0
MSH2-206ENST00000543555 SUCLA2Q9P2R7 463 aaPredicted RBP15.08■□□□□ 0
MSH2-206ENST00000543555 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms