RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 PTPN5P54829 565 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 INF2Q27J81 1249 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 GLB1LQ6UWU2 654 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 DDX53Q86TM3 631 aaKnown RBP13.29□□□□□ -0.28
PTPN6-219ENST00000542848 VPS52Q8N1B4 723 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 ASIC4Q96FT7 647 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 PHF20Q9BVI0 1012 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
PTPN6-219ENST00000542848 PIN4Q9Y237 131 aaKnown RBP13.29□□□□□ -0.28
PTPN6-219ENST00000542848 USP34Q70CQ2 3546 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 PLXNA3P51805 1871 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 CCDC194A0A1B0GVG4 234 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 EML1O00423 815 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 TBX3O15119 743 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 SLC37A4O43826 429 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 OFD1O75665 1012 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 CDKL5O76039 1030 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 GALTP07902 379 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 CTSAP10619 480 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 GCFC2P16383 781 aaKnown RBP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 MTHFRP42898 656 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 STK3Q13188 491 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 LETM2Q2VYF4 491 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 IER5LQ5T953 404 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 NEK8Q86SG6 692 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 PRSS33Q8NF86 280 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 SLC7A3Q8WY07 619 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 LPPQ93052 612 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 NAP1L4Q99733 375 aaKnown RBP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 ZBP1Q9H171 429 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 SLKQ9H2G2 1235 aaPredicted RBP13.28□□□□□ -0.28
PTPN6-219ENST00000542848 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 IFT122Q9HBG6 1241 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 KCNMB3Q9NPA1 279 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 TBC1D13Q9NVG8 400 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
PTPN6-219ENST00000542848 XBP1P17861 261 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 CA8P35219 290 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 RFC5P40937 340 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 NPEPPSP55786 919 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.29
PTPN6-219ENST00000542848 LONRF3Q496Y0 759 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 PLA2G4FQ68DD2 849 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 SRGAP1Q7Z6B7 1085 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 MRPL10Q7Z7H8 261 aaKnown RBP13.27□□□□□ -0.29
PTPN6-219ENST00000542848 ZBTB33Q86T24 672 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 TMEM173Q86WV6 379 aaPredicted RBP13.27□□□□□ -0.29
PTPN6-219ENST00000542848 C4orf19Q8IY42 314 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 CEP170P1Q96L14 293 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 NLRP4Q96MN2 994 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 POMKQ9H5K3 350 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
PTPN6-219ENST00000542848 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 KCNJ14Q9UNX9 436 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
PTPN6-219ENST00000542848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.26□□□□□ -0.29
PTPN6-219ENST00000542848 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 ASAP2O43150 1006 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 GAS2O43903 313 aaKnown RBP13.26□□□□□ -0.29
PTPN6-219ENST00000542848 AVPR2P30518 371 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 EPHA7Q15375 998 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 OTUD6AQ7L8S5 288 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 PPFIBP1Q86W92 1011 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 SLC22A17Q8WUG5 538 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 TCP11Q8WWU5 503 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
PTPN6-219ENST00000542848 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
PTPN6-219ENST00000542848 HAS1Q92839 578 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
PTPN6-219ENST00000542848 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 C2CD4DB7Z1M9 353 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 MARCH6O60337 910 aa13.25□□□□□ -0.29
PTPN6-219ENST00000542848 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 BAG4O95429 457 aaKnown RBP13.25□□□□□ -0.29
PTPN6-219ENST00000542848 ALDH2P05091 517 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms