RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 LXNQ9BS40 222 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 PHF7Q9BWX1 381 aaPredicted RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 DHX33Q9H6R0 707 aaKnown RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 CHST12Q9NRB3 414 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 FAM105AQ9NUU6 356 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 TBC1D13Q9NVG8 400 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 DACT1Q9NYF0 836 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 PUF60Q9UHX1 559 aaKnown RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 INPP5FQ9Y2H2 1132 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 COL4A3BPQ9Y5P4 624 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 TECTAO75443 2155 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 OFD1O75665 1012 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 CDKL5O76039 1030 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 P4HBP07237 508 aaKnown RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 SRGAP2CP0DJJ0 459 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 SFPQP23246 707 aaKnown RBP eCLIP22.25■■□□□ 1.15
DDX11-220ENST00000542244 HOXA11P31270 313 aaPredicted RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 HOXD11P31277 338 aaPredicted RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 EPHA7Q15375 998 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 PDE12Q6L8Q7 609 aaKnown RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 ZNF280BQ86YH2 543 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 MRPL43Q8N983 215 aaKnown RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 NSUN7Q8NE18 718 aaKnown RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 TRAIPQ9BWF2 469 aa22.25■■□□□ 1.15
DDX11-220ENST00000542244 ARIH1Q9Y4X5 557 aaPredicted RBP22.25■■□□□ 1.15
DDX11-220ENST00000542244 CLASP2O75122 1294 aaKnown RBP22.24■■□□□ 1.15
DDX11-220ENST00000542244 ZC3H11AO75152 810 aaKnown RBP eCLIP22.24■■□□□ 1.15
DDX11-220ENST00000542244 WEE2P0C1S8 567 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 GCFC2P16383 781 aaKnown RBP22.24■■□□□ 1.15
DDX11-220ENST00000542244 LAMTOR4Q0VGL1 99 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 AGMOQ6ZNB7 445 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 EDAQ92838 391 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 NGRNQ9NPE2 291 aaKnown RBP22.24■■□□□ 1.15
DDX11-220ENST00000542244 XPNPEP1Q9NQW7 623 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 HCFC2Q9Y5Z7 792 aa22.24■■□□□ 1.15
DDX11-220ENST00000542244 BTBD18B2RXH4 712 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 DDHD2O94830 711 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 SLITRK3O94933 977 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 YWHABP31946 246 aaKnown RBP22.23■■□□□ 1.15
DDX11-220ENST00000542244 PPM1AP35813 382 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 SLC11A1P49279 550 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 POLGP54098 1239 aaPredicted RBP22.23■■□□□ 1.15
DDX11-220ENST00000542244 KRT17Q04695 432 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 C4orf19Q8IY42 314 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 C12orf76Q8N812 135 aaPredicted RBP22.23■■□□□ 1.15
DDX11-220ENST00000542244 GTF3C6Q969F1 213 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 GBP3Q9H0R5 595 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 AGPAT5Q9NUQ2 364 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 PCDHB2Q9Y5E7 798 aa22.23■■□□□ 1.15
DDX11-220ENST00000542244 TBX3O15119 743 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 CXCL14O95715 111 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 GALTP07902 379 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 KRT2P35908 639 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 ANAPC15P60006 121 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 CDC42EP1Q00587 391 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 EMC2Q15006 297 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 XKR9Q5GH70 373 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 NOMO2Q5JPE7 1267 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 TPH2Q8IWU9 490 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 VPS52Q8N1B4 723 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 ZBP1Q9H171 429 aa22.22■■□□□ 1.15
DDX11-220ENST00000542244 ZNF623O75123 536 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 CA8P35219 290 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 ALDH7A1P49419 539 aaKnown RBP22.21■■□□□ 1.15
DDX11-220ENST00000542244 ZXDAP98168 799 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 SMC1AQ14683 1233 aaKnown RBP22.21■■□□□ 1.15
DDX11-220ENST00000542244 FERMT3Q86UX7 667 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 SLC7A3Q8WY07 619 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 IGSF21Q96ID5 467 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 FBXL18Q96ME1 805 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 EIF2AK1Q9BQI3 630 aaKnown RBP22.21■■□□□ 1.15
DDX11-220ENST00000542244 MRPL9Q9BYD2 267 aaKnown RBP22.21■■□□□ 1.15
DDX11-220ENST00000542244 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
DDX11-220ENST00000542244 RNF39Q9H2S5 420 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
DDX11-220ENST00000542244 MUC6Q6W4X9 2439 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 MARCH6O60337 910 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 EPCAMP16422 314 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 XBP1P17861 261 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 GLB1LQ6UWU2 654 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 TRIM67Q6ZTA4 783 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 MRPL10Q7Z7H8 261 aaKnown RBP22.2■■□□□ 1.14
DDX11-220ENST00000542244 RNF149Q8NC42 400 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 SMG8Q8ND04 991 aaKnown RBP22.2■■□□□ 1.14
DDX11-220ENST00000542244 ASAP3Q8TDY4 903 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 PSPC1Q8WXF1 523 aaKnown RBP22.2■■□□□ 1.14
DDX11-220ENST00000542244 EIF2AQ9BY44 585 aaKnown RBP22.2■■□□□ 1.14
DDX11-220ENST00000542244 TMEM60Q9H2L4 133 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 ARID2Q68CP9 1835 aa22.2■■□□□ 1.14
DDX11-220ENST00000542244 TMEM221A6NGB7 291 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 M0R296 226 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 NEFLP07196 543 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 RFC5P40937 340 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 IER5LQ5T953 404 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 TMEM169Q96HH4 297 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 CPB2Q96IY4 423 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 HSD17B14Q9BPX1 270 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 JPH2Q9BR39 696 aaPredicted RBP22.19■■□□□ 1.14
DDX11-220ENST00000542244 SMOC2Q9H3U7 446 aa22.19■■□□□ 1.14
DDX11-220ENST00000542244 POMKQ9H5K3 350 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms