RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SPA17Q15506 151 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 MAP4K3Q8IVH8 894 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 XXYLT1Q8NBI6 393 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 ANKRD7Q92527 254 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 AIPL1Q9NZN9 384 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 LCA5LO95447 670 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 SERPING1P05155 500 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 SPAG5Q96R06 1193 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 PTPN18Q99952 460 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 BRCA2P51587 3418 aa18.82■□□□□ 0.6
TMEM50B-210ENST00000542230 IPO7O95373 1038 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 STAT5BP51692 787 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 ALCAMQ13740 583 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 METTL7BQ6UX53 244 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 ZNF571Q7Z3V5 609 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 SYN2Q92777 582 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 ARID3AQ99856 593 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 PACSIN1Q9BY11 444 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 CTAGE9A4FU28 777 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 EDN1P05305 212 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 VAMP7P51809 220 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 JAM2P57087 298 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 NEDD9Q14511 834 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 ASIC2Q16515 512 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 MCPH1Q8NEM0 835 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 LMO3Q8TAP4 145 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 SPIRE2Q8WWL2 714 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 CCDC127Q96BQ5 260 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 DHX33Q9H6R0 707 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 GBA2Q9HCG7 927 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 TOPORSQ9NS56 1045 aaPredicted RBP18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 CAPN6Q9Y6Q1 641 aa18.81■□□□□ 0.6
TMEM50B-210ENST00000542230 MYH10P35580 1976 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 DKC1O60832 514 aaKnown RBP eCLIP18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 GLRA2P23416 452 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 MAGEA1P43355 309 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 PHLDB3Q6NSJ2 640 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 GPR20Q99678 358 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 INTS2Q9H0H0 1204 aaKnown RBP18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 MROH8Q9H579 483 aa18.8■□□□□ 0.6
TMEM50B-210ENST00000542230 GTPBP10A4D1E9 387 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 TADA3O75528 432 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 MOCS3O95396 460 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 TGFB3P10600 412 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 MYL7Q01449 175 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 KIF5AQ12840 1032 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 PPP2R5AQ15172 486 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 SNRNP35Q16560 246 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 CCDC62Q6P9F0 684 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 C12orf56Q8IXR9 622 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 GPRC5AQ8NFJ5 357 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 SEPT1Q8WYJ6 367 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 NAPGQ99747 312 aaPredicted RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 SSU72P8A0A1W2PR75 194 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 KRT86O43790 486 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 GFPT2O94808 682 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 TARBP2Q15633 366 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 CELF3Q5SZQ8 465 aaKnown RBP18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 TRAPPC12Q8WVT3 735 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 GPR88Q9GZN0 384 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 ARHGAP28Q9P2N2 729 aa18.79■□□□□ 0.6
TMEM50B-210ENST00000542230 CEP350Q5VT06 3117 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 TTLL13PA6NNM8 815 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 HNRNPDLO14979 420 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ADORA2AP29274 412 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 CST9Q5W186 159 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 GLG1Q92896 1179 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ZNF668Q96K58 619 aaPredicted RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ZBTB45Q96K62 511 aaPredicted RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 HAPLN2Q9GZV7 340 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 DNAJC12Q9UKB3 198 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 LRRIQ4A6NIV6 560 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 CETPP11597 493 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 KRT13P13646 458 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 AMPD2Q01433 879 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 MYBPC2Q14324 1141 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ARHGAP44Q17R89 818 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ZNF662Q6ZS27 426 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 INTS8Q75QN2 995 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ARMCX2Q7L311 632 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ARHGEF19Q8IW93 802 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 POMGNT1Q8WZA1 660 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 KAT5Q92993 513 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 SPATA33Q96N06 139 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
TMEM50B-210ENST00000542230 ZBTB42B2RXF5 422 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms