RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 Q7L0L9 218 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 CMTR2Q8IYT2 770 aaKnown RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 KCNN1Q92952 543 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 CLP1Q92989 425 aaKnown RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 EPSTI1Q96J88 318 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 FZD8Q9H461 694 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 GPRC5CQ9NQ84 441 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 ODF2LQ9ULJ1 636 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 RWDD3Q9Y3V2 267 aa15.24■□□□□ 0.03
TNFSF13B-206ENST00000542136 ERLIN2O94905 339 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 PLCG1P19174 1290 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 MBTD1Q05BQ5 628 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 GRIN2CQ14957 1233 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 MRPL10Q7Z7H8 261 aaKnown RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZNF598Q86UK7 904 aaKnown RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZBTB8OSQ8IWT0 167 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 FIBCD1Q8N539 461 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 CDX2Q99626 313 aaPredicted RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 PRMT7Q9NVM4 692 aaPredicted RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 PIN4Q9Y237 131 aaKnown RBP15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 STXBP5LQ9Y2K9 1186 aa15.23■□□□□ 0.03
TNFSF13B-206ENST00000542136 ADGRA3Q8IWK6 1321 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 LCHNA4D1U4 455 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 LRRIQ4A6NIV6 560 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 C5orf67F2Z3F1 127 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 INO80B-WBP1J3KQ70 363 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 HIP1RO75146 1068 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 RB1P06400 928 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 FGFR4P22455 802 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 NUCB2P80303 420 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 MAPK7Q13164 816 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 KARSQ15046 597 aaKnown RBP15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 AMHR2Q16671 573 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 ARSHQ5FYA8 562 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 TWF2Q6IBS0 349 aaKnown RBP15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 FAM117BQ6P1L5 589 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 NOTUMQ6P988 496 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 MAEAQ7L5Y9 396 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 DAW1Q8N136 415 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 LARP4BQ92615 738 aaKnown RBP15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 RAD54LQ92698 747 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 PLVAPQ9BX97 442 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 TMEM134Q9H6X4 195 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 LARSQ9P2J5 1176 aaKnown RBP15.22■□□□□ 0.03
TNFSF13B-206ENST00000542136 CARNS1A5YM72 827 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 H0YCG3 227 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 TSPAN1O60635 241 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 ABCD1P33897 745 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 SMTNP53814 917 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 KRT85P78386 507 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 DNM1Q05193 864 aaKnown RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 DMP1Q13316 513 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 MAPK6Q16659 721 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 NAALADL2Q58DX5 795 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 AXDND1Q5T1B0 1012 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 RRAGBQ5VZM2 374 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 DEPTORQ8TB45 409 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 SCAND2PQ9GZW5 306 aaPredicted RBP15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 CCDC113Q9H0I3 377 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 CUEDC2Q9H467 287 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 UBN1Q9NPG3 1134 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
TNFSF13B-206ENST00000542136 K7ERI5 159 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 ACKR2O00590 384 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 PLS3P13797 630 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 BMPR1AP36894 532 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 NPTX2P47972 431 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 ZNF131P52739 623 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 SPECC1Q5M775 1068 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 GAS2L1Q99501 681 aaPredicted RBP15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 PLIN2Q99541 437 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
TNFSF13B-206ENST00000542136 PCDHB2Q9Y5E7 798 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms