RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 NEK8Q86SG6 692 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
ITM2C-208ENST00000541852 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 TCP11Q8WWU5 503 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 WASF1Q92558 559 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 GJA10Q969M2 543 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 RIPOR3Q96MK2 946 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 DZANK1Q9NVP4 752 aa16.73■□□□□ 0.27
ITM2C-208ENST00000541852 PIN4Q9Y237 131 aaKnown RBP16.73■□□□□ 0.27
ITM2C-208ENST00000541852 ZNF318Q5VUA4 2279 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 WDFY4Q6ZS81 3184 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 CSDE1O75534 798 aaKnown RBP16.72■□□□□ 0.27
ITM2C-208ENST00000541852 RFC5P40937 340 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 NUBP1P53384 320 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
ITM2C-208ENST00000541852 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 EPHA7Q15375 998 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 NPY5RQ15761 445 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 LLGL2Q6P1M3 1020 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 C4orf19Q8IY42 314 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 SLFN12Q8IYM2 578 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 VPS52Q8N1B4 723 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 FBXL6Q8N531 539 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 CNNM3Q8NE01 707 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 PSPC1Q8WXF1 523 aaKnown RBP16.72■□□□□ 0.27
ITM2C-208ENST00000541852 PHF20Q9BVI0 1012 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 UBN1Q9NPG3 1134 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 HCFC2Q9Y5Z7 792 aa16.72■□□□□ 0.27
ITM2C-208ENST00000541852 CLASP2O75122 1294 aaKnown RBP16.71■□□□□ 0.27
ITM2C-208ENST00000541852 OFD1O75665 1012 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 ALDH2P05091 517 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 CTSAP10619 480 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 PBX3P40426 434 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 MRE11P49959 708 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 PTPN5P54829 565 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
ITM2C-208ENST00000541852 STK3Q13188 491 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 PTPN21Q16825 1174 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 ATAT1Q5SQI0 421 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 UBALD2Q8IYN6 164 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 CEP170P1Q96L14 293 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 NLRP4Q96MN2 994 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 DHX33Q9H6R0 707 aaKnown RBP16.71■□□□□ 0.27
ITM2C-208ENST00000541852 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
ITM2C-208ENST00000541852 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 CCNT1O60563 726 aaKnown RBP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 ZC3H11AO75152 810 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 GALTP07902 379 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 MRPL10Q7Z7H8 261 aaKnown RBP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 ZBTB33Q86T24 672 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 PRPF31Q8WWY3 499 aaKnown RBP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
ITM2C-208ENST00000541852 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 NRDE2Q9H7Z3 1164 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 PCDHB2Q9Y5E7 798 aa16.7■□□□□ 0.26
ITM2C-208ENST00000541852 TMEM150BA6NC51 233 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 NT5C1B-RDH14C9J2C7 533 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 EML1O00423 815 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 SLC37A4O43826 429 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 PFKFB2O60825 505 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 AXLP30530 894 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 CA8P35219 290 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 ANAPC15P60006 121 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
ITM2C-208ENST00000541852 KSR1Q8IVT5 923 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
ITM2C-208ENST00000541852 TMEM175Q9BSA9 504 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 ZBP1Q9H171 429 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 BRMS1Q9HCU9 246 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
ITM2C-208ENST00000541852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.68■□□□□ 0.26
ITM2C-208ENST00000541852 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
ITM2C-208ENST00000541852 NPEPPSP55786 919 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 POU5F1BQ06416 359 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 LAMTOR4Q0VGL1 99 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 SCRN1Q12765 414 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 DPP7Q9UHL4 492 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 FAN1Q9Y2M0 1017 aa16.68■□□□□ 0.26
ITM2C-208ENST00000541852 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
ITM2C-208ENST00000541852 XKR9Q5GH70 373 aa16.67■□□□□ 0.26
ITM2C-208ENST00000541852 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
ITM2C-208ENST00000541852 KIAA1841Q6NSI8 718 aa16.67■□□□□ 0.26
ITM2C-208ENST00000541852 ELMSAN1Q6PJG2 1045 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms