RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 FOPNLQ96NB1 174 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 MMP19Q99542 508 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PUS3Q9BZE2 481 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DDX56Q9NY93 547 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 KCNH4Q9UQ05 1017 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 KCNQ3O43525 872 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 NDUFA10O95299 355 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PDCLQ13371 301 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 HIBCHQ6NVY1 386 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 FAM129AQ9BZQ8 928 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 SERPIND1P05546 499 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 CDK8P49336 464 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DYNLL2Q96FJ2 89 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PAGE5Q96GU1 130 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 MTIF3Q9H2K0 278 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PLAAQ9Y263 795 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DFFAO00273 331 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 MMEP08473 750 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ADORA2BP29275 332 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 GPC5P78333 572 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 KIF23Q02241 960 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 KYAT1Q16773 422 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 TMEM270Q6UE05 265 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 NOP53Q9NZM5 478 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 TJP2Q9UDY2 1190 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 A0A1B0GW55 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PIK3R2O00459 728 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 CHUKO15111 745 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 EIF3DO15371 548 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L2P0CJ85 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L3P0CJ86 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L4P0CJ87 422 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L5P0CJ88 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L6P0CJ89 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4L7P0CJ90 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ZFXP17010 805 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PSMA3P25788 255 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 AP2B1P63010 937 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DYDC2Q96IM9 177 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 TBC1D22BQ9NU19 505 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 DUX4Q9UBX2 424 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PCDHA6Q9UN73 950 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PCDHA8Q9Y5H6 950 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PJA2O43164 708 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 MYBL1P10243 752 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 GRAPQ13588 217 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 LRRC8EQ6NSJ5 796 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ELAC2Q9BQ52 826 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 SUPT3HO75486 399 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 HAUS5O94927 633 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 APOA1P02647 267 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 PCYT1AP49585 367 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 NT5C2P49902 561 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 DMC1Q14565 340 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 LSG1Q9H089 658 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 FASTKD1Q53R41 847 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ANKRD40Q6AI12 368 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ASAP3Q8TDY4 903 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ZNF560Q96MR9 790 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 TSC22D3Q99576 134 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
GABRB3-204ENST00000541819 NFKBIL1Q9UBC1 381 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 LSM7Q9UK45 103 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
GABRB3-204ENST00000541819 PRR23D1E9PI22 279 aaPredicted RBP11.4□□□□□ -0.59
GABRB3-204ENST00000541819 F5H423 210 aaPredicted RBP11.4□□□□□ -0.59
GABRB3-204ENST00000541819 KRT7P08729 469 aa11.4□□□□□ -0.59
GABRB3-204ENST00000541819 PRR23D2P0DMB1 279 aaPredicted RBP11.4□□□□□ -0.59
GABRB3-204ENST00000541819 KRT76Q01546 638 aa11.4□□□□□ -0.59
GABRB3-204ENST00000541819 HIF1AQ16665 826 aa11.4□□□□□ -0.59
GABRB3-204ENST00000541819 TBC1D1Q86TI0 1168 aaPredicted RBP11.4□□□□□ -0.59
GABRB3-204ENST00000541819 THOC1Q96FV9 657 aaKnown RBP11.4□□□□□ -0.59
GABRB3-204ENST00000541819 FAM213AQ9BRX8 229 aa11.4□□□□□ -0.59
GABRB3-204ENST00000541819 CEP72Q9P209 647 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms