RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 SOX5P35711 763 aa12.85□□□□□ -0.35
EIF3A-203ENST00000541549 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
EIF3A-203ENST00000541549 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
EIF3A-203ENST00000541549 RBM41Q96IZ5 413 aaKnown RBP12.85□□□□□ -0.35
EIF3A-203ENST00000541549 APOL6Q9BWW8 343 aa12.85□□□□□ -0.35
EIF3A-203ENST00000541549 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 MYMKA6NI61 221 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 KRT3P12035 628 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 KCNJ1P48048 391 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 RUBCNQ92622 972 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ERP27Q96DN0 273 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 DHX36Q9H2U1 1008 aaKnown RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 NDE1Q9NXR1 346 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SLC16A4O15374 487 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SASH3O75995 380 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 KRT38O76015 456 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 HSPA4LO95757 839 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ZNF18P17022 549 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ARL4AP40617 200 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 VAMP7P51809 220 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 NOP14P78316 857 aaKnown RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SEMA3FQ13275 785 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 EZH2Q15910 746 aaKnown RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 FAM182BQ5T319 152 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SLC35G2Q8TBE7 412 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ANKRD36BP1Q96IX9 119 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 CREB3O43889 395 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 GRAMD1AQ96CP6 724 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SUDS3Q9H7L9 328 aaPredicted RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 LRRC36Q1X8D7 754 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 C4orf33Q8N1A6 199 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SNF8Q96H20 258 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
EIF3A-203ENST00000541549 ANKARQ7Z5J8 1434 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CCT8L1PA6NM43 557 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CDH16O75309 829 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 GH2P01242 217 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 KRT10P13645 584 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
EIF3A-203ENST00000541549 COPB2P35606 906 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CYB5D1Q6P9G0 228 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 USP38Q8NB14 1042 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 TMEM35BQ8NCS4 154 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CLTCL1P53675 1640 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 PNPLA7Q6ZV29 1317 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 RANBP1P43487 201 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 MTM1Q13496 603 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 SLC29A2Q14542 456 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 KYNUQ16719 465 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 TRIM65Q6PJ69 517 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 LRIG3Q6UXM1 1119 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 FGD4Q96M96 766 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 NEO1Q92859 1461 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 TMEM120BA0PK00 339 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 ABL1P00519 1130 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 OCRLQ01968 901 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 KDSRQ06136 332 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 TMED8Q6PL24 325 aaPredicted RBP12.83□□□□□ -0.36
EIF3A-203ENST00000541549 THNSL1Q8IYQ7 743 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 VPS11Q9H270 941 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 EPB41L4AQ9HCS5 686 aaPredicted RBP12.83□□□□□ -0.36
EIF3A-203ENST00000541549 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 HPSEQ9Y251 543 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
EIF3A-203ENST00000541549 CLDN3O15551 220 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 LPXNO60711 386 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 HSD17B3P37058 310 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 KLC1Q07866 573 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 ALCAMQ13740 583 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
EIF3A-203ENST00000541549 RSRC2Q7L4I2 434 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms