RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CRIPAKQ8N1N5 446 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 GALNT15Q8N3T1 639 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 ZNF610Q8N9Z0 462 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 OR10H5Q8NGA6 315 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 ZFPM2Q8WW38 1151 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 IPCEF1Q8WWN9 437 aaPredicted RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 NSUN5Q96P11 429 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 ACAP3Q96P50 834 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.26□□□□□ -1.41
DDB1-219ENST00000541513 ABCG4Q9H172 646 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MBIPQ9NS73 344 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 H2AFY2Q9P0M6 372 aaPredicted RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 MAGED2Q9UNF1 606 aaPredicted RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 TRIM33Q9UPN9 1127 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 COQ6Q9Y2Z9 468 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 PCDHGB2Q9Y5G2 931 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 GPR45Q9Y5Y3 372 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 A0A1W2PP64 1363 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 PIK3C2AO00443 1686 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 EDC4Q6P2E9 1401 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 GOLGA6L3A6NEY3 463 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 CPLX1O14810 134 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 USO1O60763 962 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 CD2BP2O95400 341 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 POLBP06746 335 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 SNRPB2P08579 225 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 ZNF865P0CJ78 1059 aaPredicted RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ATF7P17544 494 aaPredicted RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 GRK4P32298 578 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 KIF5BP33176 963 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ATP11AP98196 1134 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 EFR3AQ14156 821 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 TESK1Q15569 626 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 MFSD4BQ5TF39 518 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 LMBR1LQ6UX01 489 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 MILR1Q7Z6M3 343 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 TSPYL6Q8N831 410 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 RNF152Q8N8N0 203 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ANKRD52Q8NB46 1076 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 FAM13CQ8NE31 585 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 RFFLQ8WZ73 363 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 LRRC59Q96AG4 307 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 ITPKCQ96DU7 683 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ACSBG1Q96GR2 724 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 APIPQ96GX9 242 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 RADILQ96JH8 1075 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 C7orf26Q96N11 449 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ZDHHC5Q9C0B5 715 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 CNTD2Q9H8S5 307 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ABCF3Q9NUQ8 709 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 CEP72Q9P209 647 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ORC3Q9UBD5 711 aaPredicted RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 XPO7Q9UIA9 1087 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 SERPINB13Q9UIV8 391 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 NPFFR2Q9Y5X5 522 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 KTN1Q86UP2 1357 aaKnown RBP6.25□□□□□ -1.41
DDB1-219ENST00000541513 PNPLA6Q8IY17 1366 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 JCADQ9P266 1359 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 SPATA31A3Q5VYP0 1347 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 TTC21AQ8NDW8 1320 aa6.25□□□□□ -1.41
DDB1-219ENST00000541513 PGPEP1LA6NFU8 196 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 TSPY2A6NKD2 308 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SYT5O00445 386 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 NDUFS2O75306 463 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SOAT2O75908 522 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 KCNH1O95259 989 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 KRT1P04264 644 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 TSPY3P0CV98 308 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 TSPY8P0CW00 308 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 ITGA4P13612 1032 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 ATP6V1B1P15313 513 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 KCNJ6P48051 423 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 HSPA7P48741 367 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 GPLD1P80108 840 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SMAD3P84022 425 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 TSPY1Q01534 308 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 ALDH6A1Q02252 535 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 CYP4F3Q08477 520 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SCARB2Q14108 478 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 MBTPS1Q14703 1052 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SMAD2Q15796 467 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 MPEG1Q2M385 716 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 CC2D1BQ5T0F9 858 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 UBXN11Q5T124 520 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 CFAP58Q5T655 872 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 NUGGCQ68CJ6 796 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 DENND5AQ6IQ26 1287 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 KCNT2Q6UVM3 1135 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 DAAM2Q86T65 1068 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 HEATR4Q86WZ0 1026 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 GALNT13Q8IUC8 556 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 PHACTR4Q8IZ21 702 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 KREMEN2Q8NCW0 462 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 PCDH19Q8TAB3 1148 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 ADAMTS15Q8TE58 950 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 HERVK_113Q902F9 699 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 DDX17Q92841 729 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms