RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 STAT3P40763 770 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 PDE4DQ08499 809 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 KCTD2Q14681 263 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 CRYMQ14894 314 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 PTGISQ16647 500 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 CEP85LQ5SZL2 805 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 GKAP1Q5VSY0 366 aaPredicted RBP11.31□□□□□ -0.6
CHFR-219ENST00000541341 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
CHFR-219ENST00000541341 CENPPQ6IPU0 288 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 SV2BQ7L1I2 683 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 HOOK3Q86VS8 718 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 TINF2Q9BSI4 451 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 NDST4Q9H3R1 872 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 FAM114A2Q9NRY5 505 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 KLC4Q9NSK0 619 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 CEP72Q9P209 647 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 INTUQ9ULD6 942 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 RIPK3Q9Y572 518 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 REV3LO60673 3130 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 TCF20Q9UGU0 1960 aaKnown RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 MYADML2A6NDP7 307 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 B4DLN1 442 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 F5H6K3 240 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 VWA5AO00534 786 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 SLC25A27O95847 323 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 PAEPP09466 180 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 CLTBP09497 229 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 RAG1P15918 1043 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 KLRC3Q07444 240 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 C2orf54Q08AI8 447 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 CRELD2Q6UXH1 353 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 GBP7Q8N8V2 638 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 MAFAQ8NHW3 353 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 ZNF473Q8WTR7 871 aaKnown RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 NSRP1Q9H0G5 558 aaKnown RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 SLITRK6Q9H5Y7 841 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 ZNF214Q9UL59 606 aaPredicted RBP11.3□□□□□ -0.6
CHFR-219ENST00000541341 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 MYO9BQ13459 2157 aa11.3□□□□□ -0.6
CHFR-219ENST00000541341 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 PLA2G6O60733 806 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 NDUFB10O96000 172 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 PDHBP11177 359 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 FOSL2P15408 326 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 FNTAP49354 379 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 MRPL12P52815 198 aaKnown RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 SLC8A3P57103 927 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 PDIA5Q14554 519 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 GRM4Q14833 912 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 SNX17Q15036 470 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 NAB2Q15742 525 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 WLSQ5T9L3 541 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 NAA35Q5VZE5 725 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 RNF180Q86T96 592 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 CABP7Q86V35 215 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 SMYD4Q8IYR2 804 aaPredicted RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 KCTD17Q8N5Z5 321 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 VTI1AQ96AJ9 217 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 RSRC1Q96IZ7 334 aaKnown RBP11.29□□□□□ -0.6
CHFR-219ENST00000541341 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
CHFR-219ENST00000541341 BLZF1Q9H2G9 400 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms