RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CPLX4Q7Z7G2 160 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 KIAA0895Q8NCT3 520 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CPA5Q8WXQ8 436 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 TXNDC16Q9P2K2 825 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 PIN4Q9Y237 131 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ZNF541Q9H0D2 1346 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GOLGA6L7A0A1B0GV03 622 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GOLGA6CA6NDK9 693 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 MEIS2O14770 477 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GRIN3BO60391 1043 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 ATP9AO75110 1047 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 VIMP08670 466 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GOLGA6DP0CG33 693 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 CTNNA1P35221 906 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 HERVK_113P62684 666 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GIT2Q14161 759 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 DNAJC24Q6P3W2 148 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SNX25Q9H3E2 840 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 A1CFQ9NQ94 594 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GOLGA6AQ9NYA3 693 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 CEP72Q9P209 647 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 ATP8A1Q9Y2Q0 1164 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 RIPK3Q9Y572 518 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 KNDC1Q76NI1 1749 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 GRAP2O75791 330 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 DGAT1O75907 488 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 VTNP04004 478 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 PDGFRBP09619 1106 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 ZNF286BP0CG31 522 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 NLRP11P59045 1033 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 PRAMEF19Q5SWL8 479 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 KRT39Q6A163 491 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SYT2Q8N9I0 419 aaPredicted RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 DAGLBQ8NCG7 672 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 FAM76AQ8TAV0 307 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SYT17Q9BSW7 474 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 DDX47Q9H0S4 455 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 H7C0C1 242 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 PRKCBP05771 671 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SAT1P21673 171 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 ATP5OP48047 213 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 CASP5P51878 434 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 CCDC170Q8IYT3 715 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 HACE1Q8IYU2 909 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 RSAD2Q8WXG1 361 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 HSPH1Q92598 858 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 HAS1Q92839 578 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 SPATC1LQ9H0A9 340 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 BLOC1S4Q9NUP1 217 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 BZW2Q9Y6E2 419 aaKnown RBP10.28□□□□□ -0.76
TTC39C-203ENST00000540918 FAM169AQ9Y6X4 670 aa10.28□□□□□ -0.76
TTC39C-203ENST00000540918 PDXKO00764 312 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 AKAP3O75969 853 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 PAK2Q13177 524 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 PAN2Q504Q3 1202 aaKnown RBP10.27□□□□□ -0.76
TTC39C-203ENST00000540918 DSTYKQ6XUX3 929 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 CCNYQ8ND76 341 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 KIF12Q96FN5 646 aa10.27□□□□□ -0.76
TTC39C-203ENST00000540918 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.76
TTC39C-203ENST00000540918 GBA2Q9HCG7 927 aaPredicted RBP10.27□□□□□ -0.76
TTC39C-203ENST00000540918 SLITRK3O94933 977 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 KIF4AO95239 1232 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 KRT15P19012 456 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 ADORA2BP29275 332 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 GPC2Q8N158 579 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 FBXL16Q8N461 479 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 GMCL1P1Q8NEA9 526 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 FBXL13Q8NEE6 735 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.27□□□□□ -0.77
TTC39C-203ENST00000540918 RIT2Q99578 217 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 PXMP2Q9NR77 195 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 OGFRQ9NZT2 677 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 TBK1Q9UHD2 729 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 TTC7AQ9ULT0 858 aaPredicted RBP10.27□□□□□ -0.77
TTC39C-203ENST00000540918 JRKLQ9Y4A0 524 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 PI4K2BG5E9Z4 385 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 SGK1O00141 431 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 EVI5O60447 810 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 UPP2O95045 317 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 GAS8O95995 478 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 CALCAP01258 141 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 PLS3P13797 630 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 PHKA2P46019 1235 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 FMO5P49326 533 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 RGS7P49802 495 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 CLCN6P51797 869 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 ATP11AP98196 1134 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 PGM5Q15124 567 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 RSPH3Q86UC2 560 aa10.27□□□□□ -0.77
TTC39C-203ENST00000540918 ERICH1Q86X53 443 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms