RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
SMAD3-204ENST00000540846 PDXKO00764 312 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 CCP110O43303 1012 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-204ENST00000540846 DGAT1O75907 488 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 C22orf31O95567 290 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 DNTTIP2Q5QJE6 756 aaKnown RBP13.7□□□□□ -0.22
SMAD3-204ENST00000540846 FKBP15Q5T1M5 1219 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 LINC01465Q8N7H1 131 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 PPP1R13LQ8WUF5 828 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 PPP1R13BQ96KQ4 1090 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-204ENST00000540846 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 MTG1Q9BT17 334 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-204ENST00000540846 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 OGDHLQ9ULD0 1010 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
SMAD3-204ENST00000540846 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 HIP1RO75146 1068 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 GCNT3O95395 438 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 RFC5P40937 340 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TERF1P54274 439 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 SOX10P56693 466 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-204ENST00000540846 EMC2Q15006 297 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 FIGNQ5HY92 759 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 ZNF484Q5JVG2 852 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 RNF180Q86T96 592 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 ZBTB10Q96DT7 871 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 IQCDQ96DY2 449 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TSEN34Q9BSV6 310 aaKnown RBP13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
SMAD3-204ENST00000540846 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
SMAD3-204ENST00000540846 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 CALUO43852 315 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 MYCP01106 439 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 ACLYP53396 1101 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 PPFIA1Q13136 1202 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 DRP2Q13474 957 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 SYCP1Q15431 976 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 GRIK4Q16099 956 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 MYCT1Q8N699 235 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 CCDC43Q96MW1 224 aaKnown RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 KATNAL1Q9BW62 490 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
SMAD3-204ENST00000540846 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
SMAD3-204ENST00000540846 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 RNF225M0QZC1 329 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-204ENST00000540846 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-204ENST00000540846 CETN3O15182 167 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 ZEB2O60315 1214 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 PPP1R37O75864 691 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 NR2F2P24468 414 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 POLGP54098 1239 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-204ENST00000540846 NFIL3Q16649 462 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 FAM178BQ8IXR5 827 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 MCPH1Q8NEM0 835 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 DNAJC7Q99615 494 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 STRA6Q9BX79 667 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
SMAD3-204ENST00000540846 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 NRCAMQ92823 1304 aa13.67□□□□□ -0.22
SMAD3-204ENST00000540846 A0A1W2PQJ5 194 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 SLC16A3O15427 465 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 GJB1P08034 283 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 TNNT1P13805 278 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 KLRC1P26715 233 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 NMT1P30419 496 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 KRT9P35527 623 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ARL2P36404 184 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 RTP1P59025 263 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms