RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KCNG1Q9UIX4 513 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 XIRP2A4UGR9 3374 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 REV3LO60673 3130 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 PHLPP2Q6ZVD8 1323 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 STK25O00506 426 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 SLITRK3O94933 977 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 STBD1O95210 358 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 LINC00271P0C7V0 271 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
CDCA3-208ENST00000540683 LAMTOR4Q0VGL1 99 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
CDCA3-208ENST00000540683 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 FAM102BQ5T8I3 360 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 PLA2G4FQ68DD2 849 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 NOTUMQ6P988 496 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 KCNT2Q6UVM3 1135 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 FERMT3Q86UX7 667 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 NOSTRINQ8IVI9 506 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 CCDC83Q8IWF9 413 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 KCTD17Q8N5Z5 321 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
CDCA3-208ENST00000540683 TMEM169Q96HH4 297 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 DYDC2Q96IM9 177 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 C2orf40Q9H1Z8 148 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 ENTPD7Q9NQZ7 604 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 DPP7Q9UHL4 492 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 CD207Q9UJ71 328 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
CDCA3-208ENST00000540683 BRWD1Q9NSI6 2320 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 ZMYM2Q9UBW7 1377 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 JAK2O60674 1132 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 FGFR1P11362 822 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 HOXB8P17481 243 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 MCM7P33993 719 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 PDIA5Q14554 519 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 SMC1AQ14683 1233 aaKnown RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 PPP2R5AQ15172 486 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 ZBTB8OSQ8IWT0 167 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 FAM178BQ8IXR5 827 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 CASD1Q96PB1 797 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 POLR3CQ9BUI4 534 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 TRIM6Q9C030 488 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
CDCA3-208ENST00000540683 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
CDCA3-208ENST00000540683 LARGE1O95461 756 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 RPA1P27694 616 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 NPEPPSP55786 919 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 HYAL1Q12794 435 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 COASYQ13057 564 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 ADAM15Q13444 863 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
CDCA3-208ENST00000540683 NOMO2Q5JPE7 1267 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 TMC7Q7Z402 723 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
CDCA3-208ENST00000540683 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 ADHFE1Q8IWW8 467 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 GJD3Q8N144 294 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.54□□□□□ -0.56
CDCA3-208ENST00000540683 CASP10Q92851 521 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 CWH43Q9H720 699 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 GJB4Q9NTQ9 266 aa11.54□□□□□ -0.56
CDCA3-208ENST00000540683 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
CDCA3-208ENST00000540683 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 H3BQ06 376 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-208ENST00000540683 H3BQV1 296 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 INO80B-WBP1J3KQ70 363 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 EYA4O95677 639 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 U2AF2P26368 475 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDCA3-208ENST00000540683 NRIP1P48552 1158 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 RARRES1P49788 294 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 EFNA5P52803 228 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 PTENP60484 403 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 DRP2Q13474 957 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 MRPL10Q7Z7H8 261 aaKnown RBP11.53□□□□□ -0.56
CDCA3-208ENST00000540683 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 IFT74Q96LB3 600 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 TCF25Q9BQ70 676 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 RSAD1Q9HA92 442 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms