RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 PCDHGC5Q9Y5F6 944 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 CARNS1A5YM72 827 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 MARCH6O60337 910 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 NEMFO60524 1076 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 IBSPP21815 317 aaPredicted RBP14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 RAB27AP51159 221 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 POLGP54098 1239 aaPredicted RBP14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 TRIM29Q14134 588 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 CTTNQ14247 550 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 NLRP4Q96MN2 994 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 LRFN3Q9BTN0 628 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 MINDY3Q9H8M7 445 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 XPNPEP1Q9NQW7 623 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 SPG21Q9NZD8 308 aa14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 ARIH1Q9Y4X5 557 aaPredicted RBP14.64□□□□□ -0.07
SEMA4D-223ENST00000540475 OFD1O75665 1012 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 ALADP13716 330 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 ARL2P36404 184 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 NDUFV1P49821 464 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 PTENP60484 403 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 KRT17Q04695 432 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 ORC2Q13416 577 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 MXD4Q14582 209 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 EMC2Q15006 297 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 C8orf34Q49A92 452 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 TWF2Q6IBS0 349 aaKnown RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 EP400NLQ6ZTU2 488 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 CATSPER4Q7RTX7 472 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 TPH2Q8IWU9 490 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 VN1R2Q8NFZ6 395 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 TMEM143Q96AN5 459 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 POP1Q99575 1024 aaKnown RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 MTRQ99707 1265 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 NFKBIZQ9BYH8 718 aa14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 FOXP1Q9H334 677 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 PIN4Q9Y237 131 aaKnown RBP14.63□□□□□ -0.07
SEMA4D-223ENST00000540475 DGAT1O75907 488 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 SRGAP2CP0DJJ0 459 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 SPATA31C1P0DKV0 1188 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 TXKP42681 527 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 BCAR1P56945 870 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 TMEM31Q5JXX7 168 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 UBXN11Q5T124 520 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 MRPL43Q8N983 215 aaKnown RBP14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 FBXO18Q8NFZ0 1043 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 MICAL1Q8TDZ2 1067 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 SUSD6Q92537 303 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 PGBD4Q96DM1 585 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 TCF25Q9BQ70 676 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 TMEM60Q9H2L4 133 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 IRAK3Q9Y616 596 aa14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 TDRD15B5MCY1 1934 aaKnown RBP14.62□□□□□ -0.07
SEMA4D-223ENST00000540475 MEIS3P2A8K0S8 358 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 HIDE1A8MVS5 230 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 LOC730098B7Z3J9 87 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 PER2O15055 1255 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 INPPL1O15357 1258 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 CENPBP07199 599 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 AXLP30530 894 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 SSTR3P32745 418 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 PBX3P40426 434 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 RARRES1P49788 294 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 HMGN5P82970 282 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 CBX2Q14781 532 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 SAFBQ15424 915 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 CLUL1Q15846 466 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 NOMO2Q5JPE7 1267 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 GLB1LQ6UWU2 654 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 AGMOQ6ZNB7 445 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 RNF169Q8NCN4 708 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 LPPQ93052 612 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 S1PR5Q9H228 398 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 NRDE2Q9H7Z3 1164 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 SH2B1Q9NRF2 756 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 TBC1D13Q9NVG8 400 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 CNTNAP2Q9UHC6 1331 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 WDFY4Q6ZS81 3184 aa14.61□□□□□ -0.07
SEMA4D-223ENST00000540475 DCXO43602 365 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 CSPG5O95196 566 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 GALTP07902 379 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 SMC1AQ14683 1233 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 AMHR2Q16671 573 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 DDX53Q86TM3 631 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 CCDC83Q8IWF9 413 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 CNNM3Q8NE01 707 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 IGSF21Q96ID5 467 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 C8orf76Q96K31 380 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 POLR3CQ9BUI4 534 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms