RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 TRPV6Q9H1D0 765 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 RNF41Q9H4P4 317 aaPredicted RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 HEY2Q9UBP5 337 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 LPCAT4Q643R3 524 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 CAAP1Q9H8G2 361 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
PBX1-212ENST00000540236 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 NDC80O14777 642 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 PSMG1O95456 288 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 NAA20P61599 178 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 PTPAQ15257 358 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 RABGAP1LQ5R372 815 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CROCCP2Q86T23 111 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 SLC7A5P1Q8MH63 180 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CFAP57Q96MR6 1250 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 FOXP1Q9H334 677 aaPredicted RBP11.82□□□□□ -0.52
PBX1-212ENST00000540236 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 PACSIN3Q9UKS6 424 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 ARHGAP10A1A4S6 786 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 GNA14O95837 355 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 SERPINB8P50452 374 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 ERMARDQ5T6L9 678 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 TMC3Q7Z5M5 1100 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
PBX1-212ENST00000540236 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 TRIM55Q9BYV6 548 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 KLHL4Q9C0H6 718 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 VAV1P15498 845 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 RALGDSQ12967 914 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 ZNF746Q6NUN9 644 aaPredicted RBP11.82□□□□□ -0.52
PBX1-212ENST00000540236 GJB7Q6PEY0 223 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 NAT14Q8WUY8 206 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 APPBP2Q92624 585 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 DCLRE1BQ9H816 532 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 NPTXRO95502 500 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CLPTM1O96005 669 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 GNAQP50148 359 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CYP2J2P51589 502 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 POLGP54098 1239 aaPredicted RBP11.82□□□□□ -0.52
PBX1-212ENST00000540236 DYNLT1P63172 113 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 STK4Q13043 487 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 POP1Q99575 1024 aaKnown RBP11.82□□□□□ -0.52
PBX1-212ENST00000540236 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
PBX1-212ENST00000540236 SEMA3EO15041 775 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 VCAM1P19320 739 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 ITGA6P23229 1130 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 PPP2R5DQ14738 602 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 MAGED2Q9UNF1 606 aaPredicted RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 DGKIO75912 1065 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 GH1P01241 217 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 TCHHL1Q5QJ38 904 aaPredicted RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 ALKBH5Q6P6C2 394 aaKnown RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 SYNJ2O15056 1496 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 CYP2D7A0A087X1C5 515 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 SRGNP10124 158 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 OASLQ15646 514 aaKnown RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 C1QTNF12Q5T7M4 302 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 LVRNQ6Q4G3 990 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 PRUNE1Q86TP1 453 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 PRPF39Q86UA1 669 aaKnown RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 FITM2Q8N6M3 262 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 CLPTM1LQ96KA5 538 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 CCDC22O60826 627 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 CYP11B2P19099 503 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 ESRRGP62508 458 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 PLEKHA7Q6IQ23 1121 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 HACD3Q9P035 362 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 STAT2P52630 851 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 BTBD6Q96KE9 485 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 TUBGCP5Q96RT8 1024 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 ZNF184Q99676 751 aaPredicted RBP11.81□□□□□ -0.52
PBX1-212ENST00000540236 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 SPATA7Q9P0W8 599 aa11.81□□□□□ -0.52
PBX1-212ENST00000540236 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 ZNF24P17028 368 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 MAPK11Q15759 364 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 WDR59Q6PJI9 974 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TMC5Q6UXY8 1006 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms