RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TMPRSS7Q7RTY8 843 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 METTL16Q86W50 562 aaKnown RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ABRAQ8N0Z2 381 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 DTWD2Q8NBA8 298 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 SHCBP1Q8NEM2 672 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 CYB5D2Q8WUJ1 264 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 RHOVQ96L33 236 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 FEZ1Q99689 392 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 TINF2Q9BSI4 451 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 SPATC1LQ9H0A9 340 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 WNT8AQ9H1J5 351 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 RPAP3Q9H6T3 665 aaPredicted RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
C2CD3-214ENST00000540057 TMEM59LQ9UK28 342 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 CEP131Q9UPN4 1083 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 SCN5AQ14524 2016 aa4.8□□□□□ -1.64
C2CD3-214ENST00000540057 KMT2EQ8IZD2 1858 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ZNF536O15090 1300 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 UPK3BL1B0FP48 263 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 UPK3BL2E5RIL1 263 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 GH2P01242 217 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 HPXP02790 462 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 RLBP1P12271 317 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ADORA1P30542 326 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 RFX5P48382 616 aaPredicted RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 USP14P54578 494 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 LMNB2Q03252 620 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 PSMD2Q13200 908 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 COG2Q14746 738 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ATP2B3Q16720 1220 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 FBLN7Q53RD9 439 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 TMEM201Q5SNT2 666 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 SPTY2D1Q68D10 685 aaPredicted RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 SLC4A10Q6U841 1118 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 MPZL3Q6UWV2 235 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ASCL5Q7RTU5 278 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ATG9AQ7Z3C6 839 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 BMP8AQ7Z5Y6 402 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 TTC6Q86TZ1 520 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 FOXP4Q8IVH2 680 aaPredicted RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 TEX11Q8IYF3 940 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 RPUSD2Q8IZ73 545 aaKnown RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 SLC43A3Q8NBI5 491 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 ACER1Q8TDN7 264 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 SH3RF3Q8TEJ3 882 aaPredicted RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 GDPD5Q8WTR4 605 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 CCDC120Q96HB5 630 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 SCLYQ96I15 445 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 PRRX2Q99811 253 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 GPR62Q9BZJ7 368 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 DHX36Q9H2U1 1008 aaKnown RBP4.79□□□□□ -1.64
C2CD3-214ENST00000540057 MROH8Q9H579 483 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 FAM184BQ9ULE4 1060 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 PTPRSQ13332 1948 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 FOCADQ5VW36 1801 aa4.79□□□□□ -1.64
C2CD3-214ENST00000540057 TRIOO75962 3097 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PDS5AQ29RF7 1337 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 CACNA1BQ00975 2339 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 COL4A6Q14031 1691 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 ADCY6O43306 1168 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 DUSP11O75319 330 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 VAMP4O75379 141 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 F13A1P00488 732 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PGK2P07205 417 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 LDHCP07864 332 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 C6orf222P0C671 652 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 FCER1AP12319 257 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PLCG1P19174 1290 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 CFPP27918 469 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 TPP2P29144 1249 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 ID4P47928 161 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 TAGLNQ01995 201 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 RALBP1Q15311 655 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 HERC4Q5GLZ8 1057 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 SYDE1Q6ZW31 735 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 CREG2Q8IUH2 290 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 MAPKAPK5Q8IW41 473 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PCSK9Q8NBP7 692 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 FAM13CQ8NE31 585 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PHOSPHO2Q8TCD6 241 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 NEK9Q8TD19 979 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 CRELD1Q96HD1 420 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 DIRC2Q96SL1 478 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PPP1R16BQ96T49 567 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 SLC9A7Q96T83 725 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 UPF3AQ9H1J1 476 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 ADAMTS10Q9H324 1103 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 KCNK12Q9HB15 430 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 HOXC10Q9NYD6 342 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 MUTYHQ9UIF7 546 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
C2CD3-214ENST00000540057 DIS3Q9Y2L1 958 aaKnown RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 POLR3KQ9Y2Y1 108 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 COL11A1P12107 1806 aaPredicted RBP4.78□□□□□ -1.64
C2CD3-214ENST00000540057 PARP14Q460N5 1801 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms